Job Description Q46793 Confidence 9.97% Date Thu Jan 5 12:34:14 GMT 2012 Rank 51 Aligned Residues 80 % Identity 10% Template c2dl1A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:spartin; PDBTitle: solution structure of the mit domain from human spartin Resolution UNK

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		S	L	K	E	K	I	L	L	E	T	T	A	K	I	Q	S	I	E	E	K	R	E	E	K	F	I	Q	G	Y	Y	D	G	Y	T	K	G	I	I	D	E	M	D	N	F	I	P	L	I	.	.	S	L	L	C	S	E	L	E	K	K	R	I	N	M	I	N	D	L	K	S	I	L	L	K	P	S	E	E	V	D
Query Conservation																																																		.	.
Alig confidence																																																		.	.
Template Conservation
Template Sequence		K	I	I	R	E	A	Y	K	K	A	F	L	F	V	N	K	G	L	N	T	D	E	L	G	Q	K	E	E	A	K	N	Y	Y	K	Q	G	I	G	H	L	L	R	G	I	S	I	S	S	K	E	S	E	H	T	G	P	G	W	E	S	A	R	Q	M	Q	Q	K	M	K	E	T	L	Q	N	V	R	T	R	L	E
Template Known Secondary structure																									T																					S	S					T	T				S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		93	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions