 |
Job Description | P0AAM3 | Confidence | 12.68% | Date | Thu Jan 5 11:13:17 GMT 2012 |
Rank | 99 | Aligned Residues | 50 |
% Identity | 18% | Template | d1rcqa1 |
SCOP info | Domain of alpha and beta subunits of F1 ATP synthase-like
| Alanine racemase C-terminal domain-like
| Alanine racemase
|
Resolution | 1.45 |
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | |
|
|
|
. | . | . | 30 | . | |
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|  |  |  | . | . | . | . |  |  |  |  |  | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | N | Q | A | K | V | D | V | C | G | I | Q | R | . |
. |
. |
. |
D | V | D | L | T | . |
L | V | G | S | C | D | E | N | G | Q | P | R | V | G | Q | W | V | L | V | H | V | G | F | A | M | S | V | I | N | E | A | E | A | R | D | T |
Query Conservation |   |
  |   |   |
|   |
|
|   |   |
|   |   |
| . | . | . | . |   |
|   |
|   | . |
|
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|
|
|
|   |
|
|   |
|
|
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |
|   |
|   |   |   |
|
|
|
|
|
|   |
|
|   |   |   |
|
|
|
|   |   |   |   |   |   |   |
|
|   |
|   |
|   |
| . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
A | D | G | T | L | V | F | I | D | G | K | P | G | R | L | V | G | R | V | S | M | D | M | L | T | V | D | L | T | D | H | P | Q | A | G | L | G | S | R | V | E | L | W | G | . |
. |
. |
. |
P | N | V | P | V | G | A | L | A | A | Q |
Template Known Secondary structure |   |
| T | T |
|  |  |  |  | T | T |  |  |  |  | B |
| S |
|
|
| S | S |
|  |  |  |  |
| T | T |
| T | T |
|
| T | T |
|  |  |  |  |  | S | . | . | . | . | S | S | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
| . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
281 | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | |
|
|
|
. | . | . | . | . | 330 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|