 |
Job Description | P0AAM3 | Confidence | 23.90% | Date | Thu Jan 5 11:13:17 GMT 2012 |
Rank | 42 | Aligned Residues | 46 |
% Identity | 13% | Template | c2pljA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:lysine/ornithine decarboxylase; |
PDBTitle: crystal structure of lysine/ornithine decarboxylase complexed with2 putrescine from vibrio vulnificus
|
Resolution | 1.70 Å |
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | P | G | Q | I | R | T | I | D | G | N | Q | A | K | V | D | V | C | G | I | Q | R | D | V | D | L | T | L | V | G | S | C | D | E | N | G | Q | P | R | V | G | Q | W | V | L | V | H |
Query Conservation |   |
|
|   |
|
|
|   |
|   |   |   |   |
|   |
|
|   |   |
|   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   | . |   |   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |
|
|   |
|   |
|   |
Template Sequence |   |
Y | P | L | T | T | I | K | Q | G | G | E | L | I | P | S | V | L | S | G | P | T | C | D | . |
S | V | D | V | I | A | E | N | I | L | L | P | K | L | N | N | G | D | L | V | I | G | R |
Template Known Secondary structure |   |
|
|  |  |  | S |
|
| S | S |
|  |  |  |  |  |  |  |
| S | S | S |
| . | T | T |
|  |  |  |  |  |  |  |  |  |
|
|
| T | T |
|  |  |  |  | S |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
318 | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | |
. | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|