Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAM3
Confidence48.27%DateThu Jan 5 11:13:17 GMT 2012
Rank8Aligned Residues34
% Identity29%Templatec2hc8A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:cation-transporting atpase, p-type; PDBTitle: structure of the a. fulgidus copa a-domain
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50......
Predicted Secondary structure 
















Query SS confidence 










































Query Sequence  GNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAM
Query Conservation     
 

  
  
 
 
 

        
 


 





 

Alig confidence 



















.........













Template Conservation 
    
 
 
    
    
.........  



 
  
  
Template Sequence  AKTAVVIRDGKEIAVPVEEV. . . . . . . . . AVGDIVIVRPGEKI
Template Known Secondary structure 
STTGGG
.........
TT

TT
B
Template Predicted Secondary structure 




.........







Template SS confidence 










































   224.....230.........240... ......250.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions