Job Description P0AEI6 Confidence 99.82% Date Thu Jan 5 11:23:26 GMT 2012 Rank 39 Aligned Residues 144 % Identity 20% Template c3gz6A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:mutt/nudix family protein; PDBTitle: crystal structure of shewanella oneidensis nrtr complexed2 with a 27mer dna Resolution 2.90 Å

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		6	.	.	.	10	.	.					.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.														.																	.	.
Query SS confidence									.	.	.	.														.																	.	.
Query Sequence		V	T	V	A	C	V	V	.	.	.	.	H	A	E	G	K	F	L	V	V	E	E	T	I	.	N	G	K	A	L	W	N	Q	P	A	G	H	L	E	A	D	.	.	E	T	L	V	E	A	A	A	R	E	L	W	E	E	T	G	I	S	A	Q	P	Q	H	F	I	R	M	H	Q	W	I	A	P	D	K	T	P
Query Conservation									.	.	.	.														.																	.	.
Alig confidence									.	.	.	.														.																	.	.
Template Conservation
Template Sequence		L	T	V	D	A	V	L	F	T	Y	H	D	Q	Q	L	K	V	L	L	V	Q	R	S	N	H	P	F	L	G	L	W	G	L	P	G	G	F	I	D	E	T	C	D	E	S	L	E	Q	T	V	L	R	K	L	A	E	K	T	A	V	V	P	P	Y	I	E	Q	L	C	T	V	G	N	N	S	R	D	A	R	G
Template Known Secondary structure													S	S	S										S	S	S	S	T	T					S						T	T	T			S														S	S			S											S	S	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		F	L	R	F	L	F	A	I	E	L	E	Q	I	C	P	T	Q	P	H	D	S	D	I	D	C	C	R	W	V	S	A	E	E	I	L	Q	.	.	A	S	N	L	R	S	P	L	V	A	E	S	I	R	C	Y	Q	S	G	Q	R	Y	P	L	E	M	I	G	D	F	N	W	P	F	T
Query Conservation																																						.	.
Alig confidence																																						.	.
Template Conservation
Template Sequence		W	S	V	T	V	C	Y	T	A	L	M	S	Y	Q	A	C	Q	I	Q	I	A	S	V	S	D	V	K	W	W	P	L	A	D	V	L	Q	M	P	L	A	F	D	H	L	Q	L	I	E	Q	A	R	E	R	L	T	Q	K	A	L	Y	S	L	V	P	G	F	A	L	S	E	P	F	T
Template Known Secondary structure														S									S		S	S										T	T	S		B	S	T	T																					G	G	G	G	G	S		S	S	B
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions