|   |
7 | . | . | 10 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | V | A | C | V | V | H | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | G | K | F | L | V | V | E | E | T | I | N | G | K | A | L | W | N | Q | P | A | G | H | L | E | A | D | E | T | L | V | E | A | A | A | R | E | L | W | E | E | T | G | I | S | A | Q | P |
Query Conservation |   |
  |
|   |   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|
|   |
|
|
|   |   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |   | . | . |
|   |   |
|
|
|   |
|
|   |
|
|
|   |   |   |
|
|
|
|
|
|   |
|
|
|
|
|   |
|   |   |
Template Sequence |   |
A | A | G | G | I | V | W | R | W | K | A | G | S | D | I | A | N | D | P | A | I | A | S | S | K | S | A | Q | E | Q | L | D | S | I | E | V | C | I | V | H | R | P | K | Y | D | D | . |
. |
W | S | W | P | K | G | K | L | E | Q | N | E | T | H | R | H | A | A | V | R | E | I | G | E | E | T | G | S | P | V | K | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |
| G | G | G | G | G | G | S |
|  |  |  |  |  |  | T |  |  |  |  |  |  |  |  | T | T | T | T |  | . | . |  |  |
|
|  |  |  |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| . | . |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
  |
  |   |
63 | . | . | . | . | . | . | 70 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | H | F | I | R | M | H | Q | W | I | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | D | K | T | P | F | L | R | F | L | F | A | I | E | L | E | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | C | P | T | Q | P | H | D | S | D | I | D | C | C | R | W | V | S | A | E | E | I | L | Q | A | S | N | L | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|
|   |   |
|
|
|   |   |   |
|
|   | . |
Template Sequence |   |
G | P | Y | L | C | E | V | E | Y | P | L | S | E | E | G | K | K | T | R | H | S | H | D | C | T | A | D | T | K | H | T | L | Y | W | X | A | Q | P | I | S | A | D | D | A | E | H | L | L | D | A | F | G | P | V | H | R | A | D | V | G | E | I | N | D | I | V | W | V | S | V | R | E | A | R | K | I | L | S | H | . |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T | T | T | S | S | S | S |
|
|
|
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  | T |  |  |  |  |
|
|
|
|
|
|
| T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |
| . |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
| . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | |
  |
  |   |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | P | L | V | A | E | S | I | R | C | Y | Q | S |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |   |   |
|
|   |   |
|   |   |
|   |   |
Template Sequence |   |
. |
S | T | D | K | D | T | L | A | V | F | V | D |
Template Known Secondary structure |   |
. |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
168 | . | 170 | . | . | . | . | . | . | . | . | . |
  |