 |
Job Description | P21165 | Confidence | 98.17% | Date | Thu Jan 5 11:37:53 GMT 2012 |
Rank | 44 | Aligned Residues | 117 |
% Identity | 15% | Template | c3qocD_ |
PDB info |
PDB header:hydrolase | Chain: D: PDB Molecule:putative metallopeptidase; |
PDBTitle: crystal structure of n-terminal domain (creatinase/prolidase like2 domain) of putative metallopeptidase from corynebacterium diphtheriae
|
Resolution | 2.15 Å |
|
 |
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | I | A | T | L | Q | E | R | T | R | D | A | L | A | R | F | K | L | D | A | L | L | I | H | S | G | E | L | F | N | V | F | L | D | D | H | P | Y | P | F | K | V | N | P | Q | F | K | A | W | V | P | V | T | Q | V | P | N | C | W | L | L | V | D | G | V | N | K | P | K | L | W | F | Y | L | P | V | D | Y | W | H |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |   |   |
|
|   |
|
|
|
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|
|   |   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . |
Template Sequence |   |
R | F | L | Q | R | R | R | A | L | S | A | Q | L | A | A | K | R | I | D | A | X | L | V | T | H | L | T | H | I | R | Y | L | S | G | F | T | G | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | A | A | L | I | I | N | K | D | L | S | A | R | I | S | T | . |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T | T | T | T | T | T |
| S |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
| S | S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  | T | T | S |
|  |  |  |  |  | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
|
|
|
|
|
  |
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 140 | . | . | . | . | |
. | . | . | . | . | 150 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | V | E | P | L | P | T | S | F | W | T | E | D | V | E | V | I | A | L | P | K | A | D | G | I | G | S | L | L | P | A | A | R | G | N | I | G | Y | I | G | P | V | P | E | R | . |
. |
. |
. |
. |
A | L | Q | L | G | I | E | A | S | . |
N | I | N | P | K | G | V | I | D | Y | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |
|   |   |   |   |
|
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |
|
|
Template Sequence |   |
. |
. |
D | G | R | Y | I | T | Q | I | A | E | Q | V | P | D | I | E | S | L | X | A | R | N | C | A | P | A | L | L | S | D | I | N | G | P | K | R | V | G | F | E | A | D | Y | L | S | V | S | Q | C | E | E | L | R | K | S | A | G | S | D | V | E | L | I | P | V | T | G | A | I |
Template Known Secondary structure |   |
. | . |
| G | G | G |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |
| S | S |  |  |  |  |  |  |  | T |
|
| S | S |  |  |  |  |  |  | T | T | T | S |
|  |  |  |  |  |  |  |  |  |  | S |
| T | T |  |  |  |  |  |  |
| S |
|
|
Template Predicted Secondary structure |   |
. | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|