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Job DescriptionP21165
Confidence100.00%DateThu Jan 5 11:37:53 GMT 2012
Rank7Aligned Residues354
% Identity18%Templatec3ctzA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:xaa-pro aminopeptidase 1; PDBTitle: structure of human cytosolic x-prolyl aminopeptidase
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70.........80.........90.
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Query Sequence  IATLQERTRDALARFKLDALLIHSGELFNVFLDDHPYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYLPVDYWHN
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Template Sequence  WKDKVADLRLKMAERNVMWFVVTALDEIAWLFNLRGSDVEHNPVF. . . . . . . . . . FSYAIIGLETIMLFIDGDRIDAPSV
Template Known Secondary structure  TTT

T

SSSSS


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SS


SGGGGS
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   178.180.........190.........200.........210.........220.. .......230.........240.......
 
   92.......100.........110.........120....... ..130.........140.........150.........160.......
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Query Sequence  VEPLPTSFWTEDVEVIALPKADGIGSLLPAARGNIG. . . . YIGPVPERALQLGIEASNINPKGVIDYLHYYRSFKTEYEL
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Template Sequence  KEHLLLDLGLEAEYRIQVHPYKSILSELKALCADLSPREKVWVSDKASYAVSETIPKDHRCCMPYTPICIAKAVKNSAES
Template Known Secondary structure  TTTTS


GGG

GGGT

TT
TTSBS
GGGSS
S

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   248.250.........260.........270.........280.........290.........300.........310.........320.......
 
   168.170.........180........ .190.........200......... 210.........220.........230. .......
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Query Sequence  ACMREAQKMAVNGHRAAEEAF. . . . . RSGMSEFDINIAYLTATGHRD. . TDVPYSNIVALNEHAAVLHYTK. . LDHQAPE
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Template Sequence  EGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPTGAIIHYAPVPETNRTLS
Template Known Secondary structure  GGGT

BTSTTSS

GGGGG
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GGG

B

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   328.330.........340.........350.........360.........370.........380.........390.........400.......
 
   239240.........250.........260..... ....270.........280.........290 .........300.........310......
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Query Sequence  EMRSFLLDAGAEYNGYAADLTRTWSAK. SDNDYAQLVKDVNDEQLALIATMKA. GVSYVDYHIQFHQRIAKLLRKHQIIT
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Template Sequence  LDEVYLIDSGAQYKDGTTDVTRTMHFETPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLD. . . . .
Template Known Secondary structure  TTS

TT


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BGGGGGGGGTTT

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   408.410.........420.........430.........440.........450.........460.........470.........480..
 
   317..320.........330.........340.. .......350.........360.........370.........380.........390....
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Query Sequence  DMSEEAMVENDLTGPFMPHGIGHPLG. . LQVHDVAGFMQDDSGTHLAAPAKYPYLRCTRILQPGMVLTIEPGIYFIESLL
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Template Sequence  . . . . . . . . . . . . . . . . YLHGTGHGVGSFLNVHEGPCGIS. . . . . . . . . . . . . YKTFSDEPLEAGMIVTDEPGYY. . . . . .
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SS
SB

SSS
SS

S

.............TT
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TT


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   483......490.........500..... ....510.........520.......
 
   395....400.........410.........420.........430....
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Query Sequence  APWREGQFSKHFNWQKIEALKPFGGIRIEDNVVIHENNVE
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Template Sequence  . . . . . . . . . . . . . . . . . . . EDGAFGIRIENVVLVVPVKTK
Template Known Secondary structure  ...................TTT
B

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   528.530.........540........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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