Job Description P21165 Confidence 100.00% Date Thu Jan 5 11:37:53 GMT 2012 Rank 10 Aligned Residues 344 % Identity 22% Template c2zsgB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:aminopeptidase p, putative; PDBTitle: crystal structure of x-pro aminopeptidase from thermotoga maritima2 msb8 Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	L	A	R	F	K	L	D	A	L	L	I	H	S	G	E	L	F	N	V	F	L	D	D	H	P	Y	P	F	K	V	N	P	Q	F	K	A	W	V	P	V	T	Q	V	P	N	C	W	L	L	V	D	G	V	N	K	P	K	L	W	F	Y	L	P	V	D	Y	W	H	N	V	E	P	L	P	T	S	F	W
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.											.	.											.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.											.	.											.	.
Template Sequence		R	S	E	R	L	I	G	I	D	A	F	L	I	M	N	I	E	N	S	A	R	A	S	S	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	F	S	G	F	T	G	S	F	.	.	S	I	I	L	I	S	E	N	T	R	.	.	L	L	I	T	D	S	R	Y	T	V	Q	A	K	Q	E	T	D	F	E	V
Template Known Secondary structure																	S	T	T	T	T					.	.	.	.	.	.	.	.	.	.	.	.								S	S		.	.							S	S			.	.						T	T	T										S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.											.	.											.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.													.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	D	V	E	V	I	A	L	P	K	A	D	G	I	G	S	L	L	P	A	A	R	G	N	I	G	Y	I	G	P	V	P	E	R	A	L	Q	L	G	I	E	A	S	N	I	N	P	K	G	V	I	D	Y	L	H	Y	Y	R	S	F	K	T	E	Y	E	L	A	C	M	R	E	A	Q	K	M	A	V	N	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	V	K	G	G	D	F	I	D	V	L	K	K	T	V	N	D	L	K	I	K	T	I	A	L	E	E	E	R	V	S	L	S	L	F	R	R	I	S	S	A	F	G	D	R	K	F	I	G	I	D	D	E	V	K	Q	M	R	M	V	K	D	E	G	E	I	E	K	I	K	Q	A	I	E	I	S	E	R	A
Template Known Secondary structure						S	S													T	T								G	G	G	S													T	T																S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		H	R	A	A	E	E	A	F	R	S	G	M	S	E	F	D	I	N	I	A	Y	L	T	A	T	G	H	R	D	T	D	.	V	P	Y	S	N	I	V	A	L	N	E	H	A	A	V	L	H	Y	T	K	L	D	H	Q	A	P	E	E	M	R	S	F	L	L	D	A	G	A	E	Y	N	G	Y	A	A	D	L	T
Query Conservation																																	.
Alig confidence																																	.																				.
Template Conservation																																																					.
Template Sequence		F	L	E	T	V	Q	Q	I	R	A	G	M	T	E	K	E	I	A	A	L	L	E	Y	T	M	R	K	E	G	A	E	G	V	A	F	D	T	I	V	A	S	G	C	R	S	A	L	P	H	G	K	.	A	S	D	K	V	V	E	R	G	D	V	I	V	I	D	F	G	A	T	Y	E	N	Y	C	A	D	I	T
Template Known Secondary structure							T	T			T	T		B															T	T		S			S	S							G	G	G	G	G		T	T			.			S		B			T	T												T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		R	T	W	S	A	K	.	S	D	N	D	Y	A	Q	L	V	K	D	V	N	D	E	Q	L	A	L	I	A	T	M	K	A	G	V	S	Y	V	D	Y	H	I	Q	F	H	Q	R	I	A	K	L	L	R	K	H	Q	I	I	T	D	M	S	E	E	A	M	V	E	N	D	L	T	G	P	F	M	P	H	G	I	G
Query Conservation								.
Alig confidence								.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	V	S	I	G	E	P	S	D	E	V	K	E	V	H	S	I	V	L	E	A	Q	E	R	A	L	K	I	A	K	A	G	V	T	G	K	L	L	D	S	V	A	R	E	F	I	R	E	K	G	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	F	G	H	S	L	G
Template Known Secondary structure						S	S	S																									T	T		B															T	T		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	B		S		S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.																				.	.	.	.	.	290	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	L	G	L	Q	V	H	D	V	A	G	F	M	Q	D	D	S	G	T	H	L	A	A	P	A	K	Y	P	Y	L	R	C	T	R	I	L	Q	P	G	M	V	L	T	I	E	P	G	I	Y	F	I	E	S	L	L	A	P	W	R	E	G	Q	F	S	K	H	F	N	W	Q	K	I	E	A	L	K	P	F	G
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	G	I	G	L	E	V	H	E	G	P	A	I	S	F	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	P	L	P	E	N	V	V	F	T	V	E	P	G	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	G	K	F
Template Known Secondary structure					S	S	S	S	S						S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	B			T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.																	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.																										.	.	.	330	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	R	I	E	D	N	V	V	I	H	E	N	N	V	E	N	M	T	R	D	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	R	I	E	E	D	V	V	L	K	E	Q	G	C	E	I	L	T	T	L	P	R
Template Known Secondary structure						B							S	S	S							S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions