Job Description P21165 Confidence 100.00% Date Thu Jan 5 11:37:53 GMT 2012 Rank 8 Aligned Residues 346 % Identity 25% Template c2howB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:356aa long hypothetical dipeptidase; PDBTitle: dipeptidase (ph0974) from pyrococcus horikoshii ot3 Resolution 2.40 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	E	R	T	R	D	A	L	A	R	F	K	L	D	A	L	L	I	H	S	G	E	L	F	N	V	F	L	D	D	H	P	Y	P	F	K	V	N	P	Q	F	K	A	W	V	P	V	T	Q	V	P	N	C	W	L	L	V	D	G	V	N	K	P	K	L	W	F	Y	L	P	V	D	Y	W	H	N	V	E	P
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		R	L	E	K	F	I	H	L	L	G	E	R	G	F	D	G	A	L	I	S	P	G	T	N	L	Y	Y	L	T	G	L	R	L	H	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	R	L	A	I	L	A	V	S	A	E	G	D	Y	.	.	R	F	L	A	P	S	L	Y	E	N	V	V	N	N
Template Known Secondary structure													T	T								S	S												S			.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S								T	T	S			.	.						G	G	G	T	T	T	T	T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.														.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		L	P	T	S	F	W	T	E	D	V	E	V	I	A	L	P	K	A	D	G	I	G	S	L	L	P	A	A	R	G	N	I	G	Y	I	G	P	V	.	.	.	P	E	R	A	L	Q	L	G	I	E	A	S	N	I	N	P	K	G	V	I	D	Y	L	H	Y	Y	R	S	F	K	T	E	Y	E	L	A	C	M	R
Query Conservation																																								.	.	.
Alig confidence													.	.	.	.	.																							.	.	.
Template Conservation													.	.	.	.	.
Template Sequence		F	P	A	T	F	W	H	D	G	E	N	.	.	.	.	.	P	Y	A	K	L	R	E	I	L	E	E	L	G	I	S	K	G	R	I	L	I	E	D	T	M	R	A	D	W	L	I	G	I	M	K	L	G	K	F	T	F	Q	P	L	S	S	L	I	K	E	L	R	M	I	K	D	K	E	E	V	K	M	M	E
Template Known Secondary structure			S						T	T	S		.	.	.	.	.												T	T		S								T	T	S									T	T	S	S							T									T	S
Template Predicted Secondary structure													.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.						.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	Q	K	M	A	V	N	G	H	R	A	A	E	E	A	F	R	S	G	M	S	E	F	D	I	N	I	A	Y	L	T	A	T	G	H	R	D	T	D	V	P	Y	S	N	I	V	A	L	N	E	H	A	A	V	L	H	Y	T	K	L	D	H	Q	A	P	E	E	M	R	S	F	L	L	D	A	G	A	E	Y
Query Conservation
Alig confidence																																																													.
Template Conservation																																																													.
Template Sequence		H	A	S	R	I	A	D	K	V	F	E	E	I	L	T	W	D	L	I	G	M	K	E	R	E	L	A	L	K	I	E	L	L	I	R	E	L	S	D	G	I	A	F	E	P	I	V	A	S	G	E	N	A	A	N	P	H	H	E	.	P	G	E	R	K	I	R	K	G	D	I	I	I	L	D	Y	G	A	R	W
Template Known Secondary structure															T	T	S			T	T		B																S	S			S	S							G	G	G	G	G		T	T			.			S		B			T	T
Template Predicted Secondary structure																																																													.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		252	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		N	G	Y	A	A	D	L	T	R	T	W	S	A	K	.	S	D	N	D	Y	A	Q	L	V	K	D	V	N	D	E	Q	L	A	L	I	A	T	M	K	A	G	V	S	Y	V	D	Y	H	I	Q	F	H	Q	R	I	A	K	L	L	R	K	H	Q	I	I	T	D	M	S	E	E	A	M	V	E	N	D	L	T	G
Query Conservation																.
Alig confidence																.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	Y	C	S	D	I	T	R	T	I	G	L	G	E	L	D	E	R	L	V	K	I	Y	E	V	V	K	D	A	Q	E	S	A	F	K	A	V	R	E	G	I	K	A	K	D	V	D	S	R	A	R	E	V	I	S	K	A	G	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T											S	S	S																								B	T	T	S	B															T	T		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	M	P	H	G	I	G	H	P	L	G	L	Q	V	H	D	V	A	G	F	M	Q	D	D	S	G	T	H	L	A	A	P	A	K	Y	P	Y	L	R	C	T	R	I	L	Q	P	G	M	V	L	T	I	E	P	G	I	Y	F	I	E	S	L	L	A	P	W	R	E	G	Q	F	S	K	H	F	N	W	Q	K
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Y	F	I	H	R	T	G	H	G	L	G	L	D	V	H	E	E	P	Y	I	G	P	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	I	L	K	N	G	M	T	F	T	I	E	P	G	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G			S		S					S	S	S	S	S						S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B			T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.																	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	A	L	K	P	F	G	G	I	R	I	E	D	N	V	V	I	H	E	N	N	V	E	N	M	T	R	D	L	K
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	V	P	G	L	G	G	V	R	I	E	D	D	I	V	V	D	E	G	K	G	R	R	L	T	K	A	E	R
Template Known Secondary structure		.	.	.		T	T	T						B							T	T					S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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