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Job DescriptionP21165
Confidence100.00%DateThu Jan 5 11:37:53 GMT 2012
Rank16Aligned Residues240
% Identity18%Templatec1yj3A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:methionine aminopeptidase; PDBTitle: crystal structure analysis of product bound methionine2 aminopeptidase type 1c from mycobacterium tuberculosis
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   158.160.........170.........180.........190.........200......... 210.........220.........230.
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Query Sequence  YRSFKTEYELACMREAQKMAVNGHRAAEEAFRSGMSEFDINIAYLTATGHRD. . . . . . TDVPYSNIVALNEHAAVLHYTK
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Template Sequence  EPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGI.
Template Known Secondary structure  S
SB

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STT
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TTTTSTT

SSTT


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   38.40.........50.........60.........70.........80.........90.........100.........110......
 
   232.......240.........250.........260..... ....270.........280.........290.........300.........310
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Query Sequence  LDHQAPEEMRSFLLDAGAEYNGYAADLTRTWSAK. SDNDYAQLVKDVNDEQLALIATMKAGVSYVDYHIQFHQRIAKLLR
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Template Sequence  PDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGY
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S
B

TT
TT
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TT

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   117..120.........130.........140.........150.........160.........170.........180.........190......
 
   311........320.........330.........340.........350.........360.........370.........380.........390
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Query Sequence  KHQIITDMSEEAMVENDLTGPFMPHGIGHPLGLQVHDVAGFMQDDSGTHLAAPAKYPYLRCTRILQPGMVLTIEPGIYFI
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Template Sequence  NV. . . . . . . . . . . . . . . . . . . . VRDFTGHGIGTTFHNGLVVLHYD. . . . . . . . . . . . QPAVETIMQPGMTFTIEPMINLG
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SSS
B
SSSSS
S

SS
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TT


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   197. .200.........210.........220. ........230.........240....
 
   391........400.........410.........420.........430........
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Query Sequence  ESLLAPWREGQFSKHFNWQKIEALKPFGGIRIEDNVVIHENNVENMTR
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Template Sequence  ALDYEIWDDGWTVVTKD. . . . . . . . RKWTAQFEHTLLVTDTGVEILTC
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S

TTS

TT........



B
SSS
S
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   245....250.........260. ........270.........280....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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