Job Description P21165 Confidence 100.00% Date Thu Jan 5 11:37:53 GMT 2012 Rank 30 Aligned Residues 239 % Identity 21% Template c1xgnB_ PDB info PDB header:aminopeptidase Chain: B: PDB Molecule:methionine aminopeptidase; PDBTitle: methionine aminopeptidase from hyperthermophile pyrococcus2 furiosus Resolution 2.90 Å

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		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	C	M	R	E	A	Q	K	M	A	V	N	G	H	R	A	A	E	E	A	F	R	S	G	M	S	E	F	D	I	N	I	A	Y	L	T	A	T	G	H	R	D	T	D	V	P	Y	S	N	I	V	A	L	N	E	H	A	A	V	L	H	Y	T	K	L	D	H	Q	A	P	E	E	M	R	S	F	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	E	K	L	M	K	A	G	E	I	A	K	K	V	R	E	K	A	I	K	L	A	R	P	G	M	L	L	L	E	L	A	E	S	I	E	K	M	I	M	E	L	G	G	K	P	A	F	P	V	N	L	S	I	N	E	I	A	A	H	Y	T	P	Y	K	G	D	T	T	V	L	K	E	G	D	Y	L	K	I
Template Known Secondary structure																						T	T			S	S		B															T	T				S	S							T	T									S	S				B			T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	G	A	E	Y	N	G	Y	A	A	D	L	T	R	T	W	S	A	K	S	D	N	D	Y	A	Q	L	V	K	D	V	N	D	E	Q	L	A	L	I	A	T	M	K	A	G	V	S	Y	V	D	Y	H	I	Q	F	H	Q	R	I	A	K	L	L	R	K	H	Q	I	I	T	D	M	S	E	E	A	M	V	E
Query Conservation
Alig confidence																								.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	G	V	H	I	D	G	F	I	A	D	T	A	V	T	V	R	V	G	M	E	.	.	E	D	E	L	M	E	A	A	K	E	A	L	N	A	A	I	S	V	A	R	A	G	V	E	I	K	E	L	G	K	A	I	E	N	E	I	R	K	R	G	F	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T											T	T	S		.	.																					T	T		B														T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																			.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	D	L	T	G	P	F	M	P	H	G	I	G	H	P	L	G	.	L	Q	V	H	D	V	A	G	F	M	Q	D	D	S	G	T	H	L	A	A	P	A	K	Y	P	Y	L	R	C	T	R	I	L	Q	P	G	M	V	L	T	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.											.														.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	I	V	N	L	S	G	H	K	I	E	R	Y	K	L	H	A	G	I	S	I	P	N	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	R	P	H	D	N	Y	V	L	K	E	G	D	V	F	A	I	E	P	F	A	T	I	G	A	G	Q	V	I	E	V	P	P	T	L	I	Y	M
Template Known Secondary structure		.	.	.	.	.	.	.		T	T		B						B	S		S	S		S				B	S	S		.	.	.	.	.	.	.	.	.	.	.	.		T	T				B			T	T											S	S	S	S						S
Template Predicted Secondary structure		.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
									147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170													.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
																									385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.						.	.	.	.	.	410	.	.	.	.	.	.	.					.	.	420			.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.														.	.	.	.				.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.														.	.	.	.				.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	I	Y	F	I	E	S	L	L	A	P	W	R	E	G	Q	F	S	K	.	.	.	.	.	H	F	N	W	Q	K	I	E	A	L	K	P	F	.	.	.	.	G	G	I	.	.	R	I	E	D	N	V	V	I	H	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.														.	.	.	.				.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.														.	.	.	.				.	.
Template Conservation
Template Sequence		Y	V	R	D	V	P	V	R	V	A	Q	A	R	F	L	L	A	K	I	K	R	E	Y	G	T	L	P	F	A	Y	R	W	L	Q	N	D	M	P	E	G	Q	L	K	L	A	L	K	T	L	E	K	A	G	A	I	Y	G	Y	P	V	L	K	E	I	R	N	G	I	V	A	Q	F	E	H	T	I	I	V	E	K
Template Known Secondary structure										S														T	T	T	S				S	G	G	G	T	T	S	S															T	T	S										T	T								B							S
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		431	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	V	E	N	M	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	V	I	V	T	T	E
Template Known Secondary structure		S					S
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions