Phyre 2 alignment of P21165 with c1b6aA

Job Description P21165
Confidence 100.00% Date Thu Jan 5 11:37:53 GMT 2012

Rank 32 Aligned Residues 258

% Identity 16% Template c1b6aA_

PDB info PDB header:angiogenesis inhibitor Chain: A: PDB Molecule:methionine aminopeptidase; PDBTitle: human methionine aminopeptidase 2 complexed with tnp-470

Resolution 1.60 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.							.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.
Query Sequence	L	H	Y	Y	R	S	F	K	T	E	Y	E	L	A	C	M	R	E	A	Q	K	M	A	V	N	G	H	R	A	A	E	E	A	F	R	S	G	M	S	E	F	D	I	N	I	A	Y	L	T	A	T	G	H	R	D	T	D	V	.	.	.	.	.	.	P	Y	S	N	I	V	A	L	N	E	H	A	A	V	L	H
Query Conservation																																																											.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.
Template Conservation
Template Sequence	E	K	K	A	L	D	Q	A	S	E	E	I	W	N	D	F	R	E	A	A	E	A	H	R	Q	V	R	K	Y	V	M	S	W	I	K	P	G	M	T	M	I	E	I	C	E	K	L	E	D	C	S	R	K	L	I	K	E	N	G	L	N	A	G	L	A	F	P	T	G	C	S	L	N	N	C	A	A	H	Y	T
Template Known Secondary structure									T																											T	T	S	B																	T		B	T	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
	154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

	229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Y	T	K	L	D	H	Q	A	P	E	E	M	R	S	F	L	L	D	A	G	A	E	Y	N	G	Y	A	A	D	L	T	R	T	W	S	A	K	S	D	N	D	Y	A	Q	L	V	K	D	V	N	D	E	Q	L	A	L	I	A	T	M	K	A	G	V	S	Y	V	D	Y	H	I	Q	F	H	Q	R	I	A	K	L
Query Conservation
Alig confidence																																										.	.
Template Conservation																																										.	.
Template Sequence	P	N	A	G	D	T	T	V	L	Q	Y	D	D	I	C	K	I	D	F	G	T	H	I	S	G	R	I	I	D	C	A	F	T	V	T	F	N	P	K	Y	D	.	.	T	L	L	K	A	V	K	D	A	T	N	T	G	I	K	C	A	G	I	D	V	R	L	C	D	V	G	E	A	I	Q	E	V	M	E	S	Y
Template Known Secondary structure			T	T				B			T	T												T	T											S	S	G	G	G		.	.																			T	T		B														T
Template Predicted Secondary structure																																										.	.
Template SS confidence
	234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

	309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence	L	R	K	H	Q	I	I	T	D	M	S	E	E	A	M	V	E	N	D	L	T	G	P	F	M	P	H	G	I	G	H	P	L	G	.	L	Q	V	H	D	V	A	G	F	M	Q	D	D	S	G	T	H	L	A	A	P	A	K	Y	P	Y	L	R	C	T	R	I	L	Q	P	G	M	V	L	T	I	E	P	G	I
Query Conservation																																			.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.																			.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	E	V	E	I	D	.	.	.	.	.	.	.	.	.	.	.	G	K	T	Y	Q	V	K	P	I	R	N	L	N	G	H	S	I	G	Q	Y	R	I	H	A	G	K	T	V	P	I	V	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	A	T	R	M	E	E	G	E	V	Y	A	I	E	T	F	G
Template Known Secondary structure					T	.	.	.	.	.	.	.	.	.	.	.	T									T	T							B	T	T	B	S			S					S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.					B			T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	312	.	.	.	.												.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.														350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

	388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	Y	F	I	E	S	L	L	A	P	W	R	E	G	Q	F	S	K	H	F	N	W	Q	K	I	E	A	L	K	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	S	T	G	K	G	V	V	H	D	D	M	E	C	S	H	Y	M	K	N	F	D	V	G	H	V	P	I	R	L	P	R	T	K	H	L	L	N	V	I	N	E	N	F	G	T	L	A	F	C	R	R	W	L	D	R	L	G	E	S	K	Y	L	M	A	L	K	N	L	C	D	L	G	I	V	D	P	Y	P	P	L
Template Known Secondary structure		S	S		S						S									T	T								S														T	T	T	S										T	T			S											T	T	S
Template Predicted Secondary structure
Template SS confidence
	368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.

					418	.	420			.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure	.	.	.	.				.	.
Query SS confidence	.	.	.	.				.	.
Query Sequence	.	.	.	.	G	G	I	.	.	R	I	E	D	N	V	V	I	H	E	N	N	V	E	N	M	T	R
Query Conservation	.	.	.	.				.	.
Alig confidence	.	.	.	.				.	.
Template Conservation
Template Sequence	C	D	I	K	G	S	Y	T	A	Q	F	E	H	T	I	L	L	R	P	T	C	K	E	V	V	S	R
Template Known Secondary structure			S	T	T														S	S					T	T
Template Predicted Secondary structure
Template SS confidence
	448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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