Job Description P67244 Confidence 5.98% Date Thu Jan 5 12:10:32 GMT 2012 Rank 16 Aligned Residues 79 % Identity 14% Template c3rkoK_ PDB info PDB header:oxidoreductase Chain: K: PDB Molecule:nadh-quinone oxidoreductase subunit k; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		V	G	G	L	L	V	M	V	M	F	S	G	Y	E	N	F	V	S	Q	L	D	I	S	E	N	K	E	K	L	N	W	L	G	K	M	D	A	T	S	L	K	N	K	V	A	A	S	I	V	A	I	S	S	I	H	L	L	R	V	F	M	D	A	K	.	N	V	P	D	N	K	L	M	W	Y	V	I	I	H	L
Query Conservation																																																																		.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	L	A	A	I	L	F	V	L	G	L	T	G	L	V	I	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	L	F	M	L	I	G	L	E	I	M	I	N	A	S	A	L	A	F	V	V	A	G	S	Y	W	G	Q	T	D	G	Q	V	M	Y	I	L	A	I	S	L
Template Known Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B																										T	T		S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.																				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	V	L	S	A	F	V	M	G	Y	L	D	R	L	T	R	H	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	A	E	A	S	I	G	L	A	L	L	L	Q	L	H	R	R	R
Template Known Secondary structure																T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions