 |
Job Description | P67244 | Confidence | 3.17% | Date | Thu Jan 5 12:10:32 GMT 2012 |
Rank | 25 | Aligned Residues | 31 |
% Identity | 6% | Template | c1uv7A_ |
PDB info |
PDB header:transport | Chain: A: PDB Molecule:general secretion pathway protein m; |
PDBTitle: periplasmic domain of epsm from vibrio cholerae
|
Resolution | 1.7 Å |
|
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | F | S | G | Y | E | N | F | V | S | Q | L | D | I | S | E | N | K | E | K | L | N | W | L | G | K | M | D | A | T | S | L |
Query Conservation |   |
  |   |
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |
|   |
|   |
|   |
|
|   |
|   | . |   |
|   |
|
|
|
|   |   |   |
|   |   |
|
Template Sequence |   |
S | T | R | Q | F | N | I | E | L | I | R | V | Q | P | R | G | E | . |
X | X | Q | V | W | I | Q | P | L | P | F | S | Q | L |
Template Known Secondary structure |   |
 |  |  |  |  | T |
|
|  |  |  |  |  |  |
| S | S | . |  |  |  |  |  |  |
|
| B |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|