Job Description P16685 Confidence 2.46% Date Thu Jan 5 11:35:31 GMT 2012 Rank 100 Aligned Residues 61 % Identity 23% Template c3llhB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:risc-loading complex subunit tarbp2; PDBTitle: crystal structure of the first dsrbd of tar rna-binding protein 2 Resolution 2.14 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	Q	P	A	E	L	A	A	R	L	N	A	L	N	I	T	A	D	Y	E	V	I	R	A	A	E	T	G	L	V	Q	I	Q	A	R	M	G	G	T	G	E	R	F	F	A	G	D	A	T	L	T	R	A	A	V	R	L	T	D	G	T	L	G	Y	S	W	V	Q	G	R	D	K	Q	H	A	E	R	C	A
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.							.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.							.	.
Template Sequence		K	T	P	I	S	L	L	Q	E	Y	G	T	R	I	G	K	T	P	V	Y	D	L	L	K	A	E	G	Q	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	F	R	V	T	V	G	D	.	T	S	C	T	G	Q	.	.	G	P	S	K	K	A	A	K	H	K	A
Template Known Secondary structure															T	T																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	.							.	.		S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.							.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																						.	.	.	.	.	.	50	.	.		.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.
		97	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	D	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	V	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions