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Job Description | P0A7F9 | Confidence | 43.23% | Date | Thu Jan 5 11:05:35 GMT 2012 |
Rank | 22 | Aligned Residues | 104 |
% Identity | 14% | Template | c3ny0D_ |
PDB info |
PDB header:metal binding protein | Chain: D: PDB Molecule:urease accessory protein uree; |
PDBTitle: crystal structure of uree from helicobacter pylori (ni2+ bound form)
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Resolution | 3.09 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
L | T | H | G | T | F | T | D | L | L | D | K | L | N | P | G | . |
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D | L | L | V | F | N | N | T | R | V | I | P | A | R | L | F | G | R | K | A | S | G | G | K | I | E | V | L | V | E | R | M | L | D | D | K | R | I | L | A | H | I | R | A | S | K | A | P | K | P | G | A | E | L | L | L | G | D | D | E | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | I | E | R | L | V | G | N | L | R | D | L | N | P | L | D | F | S | V | D | H | V | D | L | E | W | F | E | T | R | K | K | I | A | R | F | K | T | R | Q | G | K | D | I | A | I | R | L | K | D | A | . |
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P | K | L | G | L | S | Q | G | D | I | L | F | K | E | E | K | E | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
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. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
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115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
I | N | A | T | M | T | A | R | H | G | A | L | F | E | V | E | F | N | D | E | R | S | V | L | D | I | L | N | S | I | G | H | M | P | L | P | P | Y | I | D |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | A | V | N | I | L | D | S | . |
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E | V | I | H | I | Q | A | K | S | V | A | E | V | A | K | I | C | Y | E | I | G | N | R | H | A | A | L | Y | Y | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
71 | . | . | . | . | . | . | . | |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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