Job Description P0A7F9 Confidence 100.00% Date Thu Jan 5 11:05:35 GMT 2012 Rank 1 Aligned Residues 314 % Identity 45% Template c1yy3A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:s-adenosylmethionine:trna ribosyltransferase- PDBTitle: structure of s-adenosylmethionine:trna ribosyltransferase-2 isomerase (quea) Resolution 2.88 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		T	D	F	S	F	E	L	P	E	S	L	I	A	H	Y	P	M	P	E	R	S	S	C	R	L	L	S	L	D	G	P	T	G	A	L	T	H	G	T	F	T	D	L	L	D	K	L	N	P	G	D	L	L	V	F	N	N	T	R	V	I	P	A	R	L	F	G	R	K	.	A	S	G	G	K	I	E	V	L	V
Query Conservation																																																																							.
Alig confidence																																																																							.
Template Conservation
Template Sequence		D	L	F	D	F	E	L	P	E	R	L	I	A	Q	V	P	L	E	Q	R	D	A	S	R	L	M	V	L	D	K	H	T	G	E	L	T	D	S	S	F	K	H	I	I	S	F	F	N	E	G	D	C	L	V	L	N	N	T	R	V	L	P	A	R	L	F	G	T	K	E	D	T	G	A	K	V	E	L	L	L
Template Known Secondary structure				S						T	T	T	B		S	S			T	T	S	T	T	S	B						T	T	T							B	T	T	G	G	G	G	G			T	T										S										S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	M	L	D	D	K	R	I	L	A	H	I	R	A	S	K	A	P	K	P	G	A	E	L	L	L	G	D	D	E	S	I	N	A	T	M	T	A	R	H	G	A	L	F	E	V	E	F	N	D	E	R	S	V	L	D	I	L	N	S	I	G	H	M	P	L	P	P	Y	I	D	R	P	D	E	D	A	D	R
Query Conservation
Alig confidence																																																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		L	K	Q	E	T	G	D	K	W	E	T	L	A	K	P	A	K	R	V	K	K	G	T	V	V	T	F	G	D	G	R	L	K	A	I	C	T	E	E	L	E	H	G	G	R	K	M	E	F	Q	Y	D	G	I	F	Y	E	V	L	E	S	L	G	E	M	P	L	P	P	Y	I	K	E	Q	L	D	.	.	.	.
Template Known Secondary structure						S	T	T							T	T	G	G	G	S		T	T						T	T	S	S	S									T	T	S									S	S											T									T	T	S	S	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	Y	Q	T	V	Y	S	E	K	P	G	A	V	A	A	P	T	A	G	L	H	F	D	E	P	L	L	E	K	L	R	A	K	G	V	E	M	A	F	V	T	L	H	V	G	A	G	T	F	Q	P	V	R	V	D	T	I	E	D	H	I	M	H	S	E	Y	A	E	V	P	Q	D	V	V	D	A	V	L	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	D	K	E	A	A	A	P	T	A	G	L	H	F	T	E	E	I	L	Q	Q	L	K	D	K	G	V	Q	I	E	F	I	T	L	H	V	G	L	G	T	F	.	.	.	.	.	.	.	.	.	.	.	R	M	H	A	E	F	Y	Q	M	S	E	E	T	A	A	A	L	N	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	S							S	S	T	T														T										S	G	G	G	G	G	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.												200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	A	R	G	N	R	V	I	A	V	G	T	T	S	V	R	S	L	E	S	A	A	Q	A	A	K	N	D	L	I	E	P	F	F	D	D	T	Q	I	F	I	Y	P	G	F	Q	Y	K	V	V	D	A	L	V	T	N	F	H	L	P	E	S	T	L	I	M	L	V	S	A	F	A	G	Y	Q	H	T	M	N
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		V	R	E	N	G	G	R	I	I	S	V	G	T	T	S	T	R	T	L	E	T	I	A	G	.	E	H	D	G	Q	F	K	A	S	S	G	W	T	S	I	F	I	Y	P	G	Y	E	F	K	A	I	D	G	M	I	T	N	F	H	L	P	K	S	S	L	I	M	L	V	S	A	L	A	G	R	E	N	I	L	R
Template Known Secondary structure					T	T								T	T	T										.	T	T	T	S															T	T				S	S		S									T	T	S	S
Template Predicted Secondary structure																										.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	K	A	A	V	E	E	K	Y	R	F	F	S	Y	G	D	A	M	F	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	N	H	A	V	E	E	E	Y	R	F	F	S	F	G	D	A	M	L	I
Template Known Secondary structure									T	T			B	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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