Job Description P30128 Confidence 44.80% Date Thu Jan 5 11:45:49 GMT 2012 Rank 38 Aligned Residues 53 % Identity 19% Template c2pjhB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: strctural model of the p97 n domain- npl4 ubd complex Resolution UNK

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	F	G	A	W	V	E	I	E	N	D	D	G	V	T	H	R	F	R	I	V	G	Y	D	E	I	F	G	R	K	D	Y	I	S	I	D	S	P	M	A	R	A	L	L	K	K	E	V	G	D	L	A	V	V	N
Query Conservation
Alig confidence												.	.	.
Template Conservation												.	.	.
Template Sequence		L	F	R	G	D	T	V	L	L	K	.	.	.	G	K	K	R	R	E	A	V	C	I	V	L	S	D	D	T	C	S	D	E	K	I	R	M	N	R	V	V	R	N	N	L	R	V	R	L	G	D	V	I	S	I	Q
Template Known Secondary structure				S	S							.	.	.		S	T	T											T	T	S		S	S												T	T			T	T
Template Predicted Secondary structure												.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions