Return to main results Retrieve Phyre Job Id

Job DescriptionP30128
Confidence24.52%DateThu Jan 5 11:45:49 GMT 2012
Rank71Aligned Residues45
% Identity11%Templatec2krgA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:na(+)/h(+) exchange regulatory cofactor nhe-rf1; PDBTitle: solution structure of human sodium/ hydrogen exchange2 regulatory factor 1(150-358)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   90.........100...... ...110.........120.........130.......
Predicted Secondary structure 



.



















Query SS confidence 
















.






























Query Sequence  WVEIENDDGVTHRFRIV. GYDEIFGRKDYISIDSPMARALLKKEVGDLA
Query Conservation   
 
 
  
      

.
  
 
     

  



 



   

 
Alig confidence 




.










.




















..







Template Conservation     
 .
   
 

 
       



  
  



  
..

  

 
Template Sequence  LCTMK. KGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEAS. . GLRAQDRI
Template Known Secondary structure  .

SSSS



SSS
S
B
TTS..T

TT
B
Template Predicted Secondary structure  .
















..





Template SS confidence 
















































   154.... .160.........170.........180.........190. ........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions