Job Description P30128 Confidence 93.22% Date Thu Jan 5 11:45:49 GMT 2012 Rank 12 Aligned Residues 95 % Identity 16% Template c1w26B_ PDB info PDB header:chaperone Chain: B: PDB Molecule:trigger factor; PDBTitle: trigger factor in complex with the ribosome forms a2 molecular cradle for nascent proteins Resolution 2.7 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		R	E	I	D	R	R	V	R	Y	L	T	K	C	L	E	N	L	K	I	V	D	Y	S	P	Q	Q	E	G	K	V	F	F	G	A	W	V	E	I	.	.	.	E	N	D	D	G	V	T	H	R	F	R	I	V	G	Y	D	E	I	F	G	R	K	D	Y	I	S	I	D	S	P	M	A	R	A	L	L	K	K	E
Query Conservation																																								.	.	.
Alig confidence																																								.	.	.													.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.
Template Sequence		A	D	V	D	G	X	L	D	T	L	R	K	Q	Q	A	T	W	K	E	K	D	G	A	V	E	A	E	D	R	V	T	I	D	F	T	G	S	V	D	G	E	E	F	E	G	G	K	A	S	D	F	V	L	.	.	.	.	.	.	.	.	A	X	G	Q	G	R	X	I	P	G	F	E	D	G	I	K	G	H	K
Template Known Secondary structure														T	T								S	S			T	T											B	T	T	B			T	T									.	.	.	.	.	.	.	.		S	S	S			S		T	T						T	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.									.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.			.	.	.												.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	D	L	A	V	V	N	T	.	.	P	A	G	.	.	.	.	.	.	.	.	.	.	.	E	A	S	W	Y	V	N	A	I	E	Y	V	K	P
Query Conservation											.	.				.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	E	E	F	T	I	D	V	T	F	P	E	E	Y	H	A	E	N	L	K	G	K	A	A	K	F	A	I	N	L	K	K	V	E	E	R	E	L
Template Known Secondary structure		T	T											T	T		S		T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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