Return to main results Retrieve Phyre Job Id

Job DescriptionP30128
Confidence27.41%DateThu Jan 5 11:45:49 GMT 2012
Rank62Aligned Residues100
% Identity16%Templatec1e0tD_
PDB info PDB header:phosphotransferaseChain: D: PDB Molecule:pyruvate kinase; PDBTitle: r292d mutant of e. coli pyruvate kinase
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90. ........100.........110....
Predicted Secondary structure 





















...








Query SS confidence 





















































. . .






















Query Sequence  SLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWV. . . EIENDDGVTHRFRIVGYDEIFGR
Query Conservation    


 




 



     
 

  
   
  
 

         
  

 
... 
 
  
      


  
 
  
Alig confidence 



..........























.














...










..









Template Conservation 


 .......... 
     
  

         
 
.  

 




 
       
 
  
  
 ..
         
Template Sequence  SHGD. . . . . . . . . . YAEHGQRIQNLRNVMSKTGKTAAI. LLDTKGPEIRTMKLEGGNDVSLKAGQTFT. . FTTDKSVIGN
Template Known Secondary structure  TSS
..........



.





BB

BGGG


TT
..S
TT

BB
Template Predicted Secondary structure 



..........




.











..






Template SS confidence 















































































   36... 40.........50.........60... ......70.........80.........90.. .......100..
 
   115....120.........130.........140.........150....
Predicted Secondary structure 


















Query SS confidence 







































Query Sequence  KDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE
Query Conservation     

  



 



   

 
 
  
 
     
  
 
Alig confidence 








..














..











Template Conservation     
 
   .. 
   
  

 
 

..

 
 
 
    
Template Sequence  SEMVAVTYE. . GFTTDLSVGNTVLVD. . DGLIGMEVTAIE
Template Known Secondary structure  TTBS
T..T

TT
T..TTT
Template Predicted Secondary structure 

..




..

Template SS confidence 







































   103......110. ........120...... ...130........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions