Return to main results Retrieve Phyre Job Id

Job DescriptionP39367
Confidence98.71%DateThu Jan 5 11:59:58 GMT 2012
Rank259Aligned Residues109
% Identity15%Templated1yuba_
SCOP infoS-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases rRNA adenine dimethylase-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80.........90........ .100...
Predicted Secondary structure 





























.




Query SS confidence 









































































.




Query Sequence  YATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY. VANEK
Query Conservation     
     
 

 







 
     

      
 
 
                                .     
Alig confidence 
































.























...












.




Template Conservation     

          




 
 
 

  
   .   
 




  
   
       ...    

  
 
        
Template Sequence  LNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI. SKQVTSIELDSHLFNLSSEKLKLN. . . TRVTLIHQDILQFQFPNKQ
Template Known Secondary structure 



SS
S


SS
S.SSSSSS
SSSSSSS
TTTT
...S

S

TTTT


SS
Template Predicted Secondary structure 











.








...











Template SS confidence 















































































   18.20.........30.........40.........50 .........60.........70.... .....80.........90...
 
   104.....110.........120.........130.........
Predicted Secondary structure 






Query SS confidence 



































Query Sequence  CDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIG
Query Conservation   
 
          
    
    
 




 
 
 
Alig confidence 











..





















Template Conservation     

 



 
..

 

   
        
 
 
Template Sequence  RYKIVGNIPYHL. . STQIIKKVVFESRASDIYLIVE
Template Known Secondary structure 

SSS..



Template Predicted Secondary structure 



..




Template SS confidence 



































   94.....100..... ....110.........120.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions