259 d1yuba_ Probab=98.71   E-value=9.5e-10  Score=77.13  Aligned_columns=109  Identities=15%

Q ss_pred             HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH-CCCCC
Q ss_conf             99999967788788899977898589999984047752888639889678764201111123210000023111-22321
Q batch____        25 YATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-VANEK  103 (248)
Q Consensus        25 ~~~l~~~~~l~pg~rVLDiGcG~G~~~~~la~~~~~~v~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  103 (248)
                      ++.+++.+++.|+++|||||||+|.+|..|++. +..++++++++.+.....+.....   .+.....+|.... ++++.
T Consensus        18 ~~~iv~~~~~~~~~~VLEIG~G~G~lT~~L~~~-~~~v~aiEid~~l~~~l~~~~~~~---~~~~ii~~D~l~~~~~~~~   93 (245)
T d1yuba_          18 LNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI-SKQVTSIELDSHLFNLSSEKLKLN---TRVTLIHQDILQFQFPNKQ   93 (245)
T ss_dssp             HHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH-SSEEEESSSSCSSSSSSSCTTTTC---SEEEECCSCCTTTTCCCSS
T ss_pred             HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHH-CCCEEEEECCHHHHHHHHHHCCCC---CCEEEEECCHHCCCCCCCC
T ss_conf             999999658887888999779873899999861-395499935999999999742568---9669997432108888778


Q ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             249998877984127899999865423797189997
Q batch____       104 CDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIG  139 (248)
Q Consensus       104 ~D~v~~~~~~~~~~d~~~~l~~~~r~LkpgG~l~i~  139 (248)
                      +|.|+++...++  -..-.++-+.+....+..+.++
T Consensus        94 ~~~vv~NlPY~i--ss~il~~~l~~~~~~~~v~m~Q  127 (245)
T d1yuba_          94 RYKIVGNIPYHL--STQIIKKVVFESRASDIYLIVE  127 (245)
T ss_dssp             EEEEEEECCSSS--CHHHHHHHHHHCCCEEEEEEEE
T ss_pred             CCEEEEECCHHH--HHHHHHHHHHCCCCCEEEEEEE
T ss_conf             337984085000--1389999973179322999854