Return to main results Retrieve Phyre Job Id

Job DescriptionP52130
Confidence3.16%DateThu Jan 5 12:05:35 GMT 2012
Rank73Aligned Residues48
% Identity19%Templated1fv1b2
SCOP infoMHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60........ .70.........80.........90.........100.......
Predicted Secondary structure 





....















Query SS confidence 












. . . .






































Query Sequence  NGPEWNRFVTLEM. . . . KYGRIMLDTAKIIDEQDVPTHILSKLTFTLRNHPEYLEA
Query Conservation 

   



   
.... 
  

  




                  
 

 
  
Alig confidence 












....



















....














Template Conservation 








 

 




 




 


 

 

 
 ....  

 


  
 

 
Template Sequence  NGTERVRFLHRDIYNQEEDLRFDSDVGEYRAVTELGR. . . . PDAEYWNSQKDFLED
Template Known Secondary structure  TTTTTTTTT
SSSGGG....T
Template Predicted Secondary structure 











....


Template SS confidence 























































   1920.........30.........40.........50..... ....60.........70
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions