Job Description P52130 Confidence 4.28% Date Thu Jan 5 12:05:35 GMT 2012 Rank 44 Aligned Residues 94 % Identity 15% Template c3q4fG_ PDB info PDB header:dna binding protein/protein binding Chain: G: PDB Molecule:dna repair protein xrcc4; PDBTitle: crystal structure of xrcc4/xlf-cernunnos complex Resolution 5.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	L	S	S	V	N	E	I	E	T	K	L	S	A	L	L	G	S	E	T	T	G	E	I	L	F	D	L	L	C	A	N	G	P	E	W	N	R	F	V	T	L	E	M	K	Y	G	R	I	M	L	D	T	A	K	I	I	D	E	Q	D	V	P	T	H	I	L	S	K	L	T	F	T	L	R	N	H	P	E
Query Conservation
Alig confidence															.	.															.	.	.																															.
Template Conservation															.	.															.	.	.																															.
Template Sequence		E	K	G	K	Y	V	G	E	L	R	K	A	L	.	.	L	S	G	A	G	P	A	D	V	Y	T	F	N	F	.	.	.	S	K	E	S	C	Y	F	F	F	E	K	N	L	K	D	V	S	F	R	L	G	S	F	N	L	E	K	V	E	N	.	P	A	E	V	I	R	E	L	I	C	Y	C	L	D	T	I	A
Template Known Secondary structure															.	.	S	S				S	S								.	.	.		T	T	T										S	S														S		.
Template Predicted Secondary structure															.	.															.	.	.																															.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	E	A	S	V	L	S	P	D	D	V	R	Q	V	L	S	M	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	N	Q	A	K	N	E	H	L	Q	K	E	N	E	R	L	L	R	D	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions