 |
Job Description | P52130 | Confidence | 2.65% | Date | Thu Jan 5 12:05:35 GMT 2012 |
Rank | 88 | Aligned Residues | 71 |
% Identity | 23% | Template | c2l1aA_ |
PDB info |
PDB header:actin binding protein | Chain: A: PDB Molecule:formin-c; |
PDBTitle: solution nmr structure of the n-terminal gtpase-like domain of2 dictyostelium discoideum fomin c
|
Resolution | UNK |
|
 |
  |   |
41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
|
|
. | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  | . | . | . |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
Query Sequence |   |
G | S | E | T | T | G | E | I | L | F | D | L | L | C | A | N | G | P | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
W | N | R | F | V | T | L | E | M | K | Y | G | R | I | M | L | D | T | A | K | I | I | D | E | Q | D | V | P | T | H | I | L | S | K | L | T | F | T | L | R | N | H | P | . |
. |
. |
E | Y | L | E |
Query Conservation |   |
  |   |   |
|   |
|   |
|
|
|
|
|
|
|   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . |   |
|
|
|
|   |   |   |
|   |
|   |   |
|
|   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
| . | . | . |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
G | A | H | M | G | G | S | M | K | I | R | V | E | L | I | N | G | N | E | H | R | T | S | S | T | P | Q | Q | P | Q | Q | N | P | S | V | S | H | I | F | D | G | E | T | A | V | K | D | H | I | K | V | L | L | T | H | F | K | I | P | . |
. |
V | D | K | V | S | S | Y | A | L | Q | N | P | F | T | L | A | Y | V | E |
Template Known Secondary structure |   |
|
|
|
| S | S | S |  |  |  |  |  |  |  |
|
|
| S | S | S |
| S | S | S | S |
| S |
|
| S | S |
|
|  |  |  |  |  |  |
| S | S | S | B |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| . | . | G | G | G | G | G | G |  |  |  |  |
| T | T | T |
|
| B |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
107 | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
A | S | V | L | S | P | D |
Query Conservation |   |
  |
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
Template Sequence |   |
D | S | F | L | T | P | E |
Template Known Secondary structure |   |
| S | B |
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
79 | 80 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|