Job Description P06971 Confidence 35.80% Date Thu Jan 5 10:59:36 GMT 2012 Rank 39 Aligned Residues 154 % Identity 12% Template d1phoa_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 3.00

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		521	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	V	T	P	Y	F	S	Y	S	E	S	F	E	P	S	S	Q	V	G	K	D	G	N	I	F	A	P	S	K	G	K	Q	Y	E	V	G	V	K	Y	V	P	E	D	R	P	I	V	V	T	G	A	V	Y	N	L	T	K	T	N	N	L	M	A	D	P	E	G	S	F	F	S	V	E	G	G	E	I	R	A
Query Conservation
Alig confidence																																												.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.																				.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	S	D	F	A	I	S	G	A	Y	T	N	S	D	R	T	N	E	Q	N	L	Q	S	R	G	T	G	K	R	A	E	A	W	A	T	G	L	K	Y	D	A	.	.	N	N	I	Y	L	A	T	F	Y	S	E	T	R	K	M	T	P	I	T	.	.	.	.	.	.	.	.	.	.	G	G	F	A	N	K	T
Template Known Secondary structure		T	T	T	T														G	G	G	T	T	S	S	S	S		S	S														.	.	T	T												S		S			S	.	.	.	.	.	.	.	.	.	.	S	S	S		S
Template Predicted Secondary structure																																												.	.																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.											.	.	.	.	.	.	250
		601	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	V	E	I	E	A	K	A	A	L	S	A	S	V	N	V	V	G	S	Y	T	Y	T	D	A	E	Y	T	T	D	T	T	Y	K	G	N	T	P	A	Q	V	P	K	H	M	A	S	L	W	A	D	Y	T	F	F	D	G	P	L	S	G	L	T	L	G	T	G	G	R	Y	T	G	S	S	Y	G	D	P	A
Query Conservation
Alig confidence																																								.	.	.	.	.	.														.	.	.	.														.	.	.
Template Conservation																																								.	.	.	.	.	.														.	.	.	.														.	.	.
Template Sequence		Q	N	F	E	A	V	A	Q	Y	Q	F	D	F	G	L	R	P	S	L	G	Y	V	L	S	K	G	K	D	I	E	G	I	G	D	E	D	L	V	.	.	.	.	.	.	N	Y	I	D	V	G	A	T	Y	Y	F	N	K	.	.	.	.	N	M	S	A	F	V	D	Y	K	I	N	Q	L	.	.	.	D	S	D
Template Known Secondary structure													S	S	S														S	B	T	T	T	B						.	.	.	.	.	.											S	S	S	.	.	.	.	S													.	.	.		S	S
Template Predicted Secondary structure																																								.	.	.	.	.	.														.	.	.	.														.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.							.	.	.	.	.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.				.	320	.
		681	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	F	K	V	G	S	Y	T	V	V	D	A	L	V	R	Y	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	K	L	N	I	N	N	D	D	I	V	A	V	G	M	T	Y	Q	F
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions