Job Description P06971 Confidence 9.70% Date Thu Jan 5 10:59:36 GMT 2012 Rank 47 Aligned Residues 85 % Identity 9% Template d1iwga6 SCOP info Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Resolution 3.50

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																			.	.									.
Query SS confidence																			.	.									.
Query Sequence		P	Q	S	I	S	V	V	T	A	E	E	M	A	L	H	Q	P	.	.	K	S	V	K	E	A	L	S	.	Y	T	P	G	V	S	V	G	T	R	G	A	S	N	T	Y	D	H	L	I	I	R	G	F	A	A	E	G	Q	S	Q	N	N	Y	L	N	G	L	K	L	Q	G	N	F	Y	N	D	A	V	I	D	P
Query Conservation																			.	.									.
Alig confidence																			.	.									.																																	.															.	.
Template Conservation																																																														.															.	.
Template Sequence		P	Q	F	K	I	D	I	D	Q	E	K	A	Q	A	L	G	V	S	I	N	D	I	N	T	T	L	G	A	A	W	G	G	S	Y	V	N	D	F	I	D	R	G	R	V	K	K	V	Y	V	M	S	E	A	K	Y	R	M	L	P	D	.	D	I	G	D	W	Y	V	R	A	A	D	G	Q	M	.	.	V	P	F
Template Known Secondary structure																	T															T										T	T											G	G	G	S	S	S	G	G	.	G	G	T	T						T	T	S			.	.			G
Template Predicted Secondary structure																																																														.															.	.
Template SS confidence
		725	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.		.	.	.	.	.	790	.	.	.	.	.	.	.	.			.	800	.
		157	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	M	L	E	R	A	E	I	M	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	F	S	S	S	R	W	E	Y	G
Template Known Secondary structure		G	G	T
Template Predicted Secondary structure
Template SS confidence
		802	.	.	.	.	.	.	.	810	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions