Job Description P06971 Confidence 14.22% Date Thu Jan 5 10:59:36 GMT 2012 Rank 43 Aligned Residues 52 % Identity 15% Template c3ohnA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane usher protein fimd; PDBTitle: crystal structure of the fimd translocation domain Resolution 3.01 Å

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		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.												.
Query SS confidence																																							.	.	.	.	.												.
Query Sequence		G	V	S	V	G	T	R	G	A	S	N	T	Y	D	H	L	I	I	R	G	F	A	A	E	G	Q	S	Q	N	N	Y	L	N	G	L	K	L	.	.	.	.	.	Q	G	N	F	Y	N	D	A	V	I	D	.	P	Y	M	L	E	R	A	E	I	M
Query Conservation																																							.	.	.	.	.												.
Alig confidence										.	.	.	.	.	.																								.	.	.	.	.												.
Template Conservation										.	.	.	.	.	.
Template Sequence		G	A	Q	L	A	S	D	D	.	.	.	.	.	.	N	P	V	I	H	G	I	A	R	G	T	A	Q	V	T	I	K	Q	N	G	Y	D	I	Y	N	S	T	V	P	P	G	P	F	T	I	N	D	I	Y	A	A	G	N	S	G	D	L	Q	V	T
Template Known Secondary structure										.	.	.	.	.	.									S	S	S								T	T										S											T	T	T	T	S
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.							.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions