Job Description P06971 Confidence 42.93% Date Thu Jan 5 10:59:36 GMT 2012 Rank 35 Aligned Residues 91 % Identity 10% Template c3k07A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:cation efflux system protein cusa; PDBTitle: crystal structure of cusa Resolution 3.52 Å

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		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		M	A	R	S	K	T	A	Q	P	K	.	H	S	L	R	K	I	A	V	V	V	A	T	A	V	S	G	M	S	V	Y	A	Q	A	A	V	E	P	K	E	D	T	I	T	V	T	A	A	P	A	P	Q	E	S	A	W	G	P	A	A	T	I	A	A	R	Q	S	A	T	G	T	K	T	D	T	P	I	Q	K	V
Query Conservation												.
Alig confidence												.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	R	R	S	V	A	N	R	F	L	V	L	M	G	A	L	F	L	S	I	W	G	T	W	T	I	I	N	T	P	V	D	A	L	P	D	L	S	D	V	Q	V	I	I	K	T	S	Y	P	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T																						S				S	S															S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	S	I	S	V	V	T	A	E	E	M	A	L	H	Q	P	K	S	V	K	E	A	L	S	Y	T	P	G	V	S	V	G	T	R	G	A	S	N	T	Y	D	H	L	I	I	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	A	P	Q	I	V	E	N	Q	V	T	Y	P	L	T	T	T	M	L	S	V	P	G	A	K	T	V	R	G	F	S	Q	F	G	D	S	Y	V	Y	V	I
Template Known Secondary structure		.	.	.	.	.	.	.									T							T	T	T	T	S	T	T										S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions