Job Description P06971 Confidence 96.86% Date Thu Jan 5 10:59:36 GMT 2012 Rank 17 Aligned Residues 175 % Identity 11% Template c3brzA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:todx; PDBTitle: crystal structure of the pseudomonas putida toluene2 transporter todx Resolution 3.20 Å

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		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.																		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	T	W	R	G	G	V	N	Y	L	F	D	N	G	V	T	P	Y	F	S	Y	S	E	S	F	E	P	S	S	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	D	G	N	I	F	A	P	S	K	G	K	Q	Y	E	V	G	V	K	Y	V	P	E	D	R	P	I	V	V	T	G
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																																																																											.
Template Sequence		W	G	G	R	L	G	L	T	Y	K	L	T	D	N	T	V	L	G	A	M	Y	N	F	K	T	S	V	G	D	L	E	G	K	A	T	L	S	A	I	S	G	D	G	A	V	L	P	L	D	G	D	I	R	V	K	N	F	E	M	P	A	S	L	T	L	G	L	A	H	Q	F	N	E	.	R	W	V	V	A	A
Template Known Secondary structure													S	S	S											B																T	T	S																B												S	S	S	.	S
Template Predicted Secondary structure																																																																											.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.
		572	.	.	.	.	.	.	.	580	.								.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.
Query Sequence		A	V	Y	N	L	T	K	T	N	N	.	.	.	.	.	.	.	L	M	A	D	P	E	G	S	F	F	S	V	E	G	G	E	I	R	A	R	G	V	E	I	E	A	K	A	A	L	S	A	S	V	N	V	V	G	S	Y	T	Y	T	D	A	E	Y	T	T	D	T	T	Y	K	G	N	T	P	A	Q	V	P	K
Query Conservation												.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.
Template Sequence		D	I	K	R	A	Y	W	G	D	V	M	D	S	M	N	V	A	F	I	S	Q	L	G	G	I	D	V	A	L	P	H	R	Y	Q	D	I	T	V	A	S	I	G	T	A	Y	K	Y	N	N	D	L	T	L	R	A	G	Y	S	Y	A	Q	L	I	L	P	.	.	.	.	.	.	.	.	V	I	P	A	Y	L	K
Template Known Secondary structure									T	T			S									S	S																									S	S	S	S															T	.	.	.	.	.	.	.	.	T	S					S
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.									.	.	.	.	.	.	.
		645	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	M	A	S	L	W	A	D	Y	T	F	F	D	G	P	L	S	G	L	T	L	G	T	G	G	R	Y	T	G	S	S	Y	G	D	P	A	N	S	F	K	V	G	S	Y	T	V	V	D	A	L	V	R	Y	D	L
Query Conservation
Alig confidence												.	.	.	.																										.	.	.
Template Conservation												.	.	.	.																										.	.	.
Template Sequence		R	H	V	T	F	G	G	E	Y	D	.	.	.	.	F	D	K	D	S	R	I	N	L	A	I	S	F	G	L	R	E	R	V	M	L	R	Q	S	H	.	.	.	S	Q	I	N	A	V	V	S	Y	S	K	N	F
Template Known Secondary structure												.	.	.	.	S	S	S	S																						.	.	.		B
Template Predicted Secondary structure												.	.	.	.																										.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.					.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410				.	.	.	.	.	.	.	.	.	420	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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