Job Description P06971 Confidence 3.86% Date Thu Jan 5 10:59:36 GMT 2012 Rank 56 Aligned Residues 170 % Identity 13% Template c3aehB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp Resolution 2.00 Å

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		550	.	.	.	.	.	.	.	.	.	560	.	.		.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		K	G	K	Q	Y	E	V	G	V	K	Y	V	P	.	E	D	R	P	I	V	V	T	G	A	V	Y	N	L	T	K	T	N	N	L	M	A	D	P	E	G	S	F	F	S	V	E	G	G	E	I	R	A	R	G	V	E	I	E	A	K	A	A	L	S	A	S	V	N	V	V	G	S	Y	T	Y	T	D	A	E	Y
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		K	T	K	S	W	G	G	G	F	Y	A	S	G	L	F	R	S	G	A	Y	F	D	V	I	A	K	Y	I	H	N	E	N	K	Y	D	L	N	F	A	G	A	G	K	Q	N	F	R	S	H	S	L	Y	A	G	A	E	V	G	Y	R	Y	H	L	T	D	T	T	F	V	E	P	Q	A	E	L	V	W	G	R	L
Template Known Secondary structure																	T	T	S																			S	S	T	T																									T	T
Template Predicted Secondary structure
Template SS confidence
		1176	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.
		629	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	D	T	T	Y	K	G	N	T	P	A	Q	V	P	K	H	M	A	S	L	W	A	D	Y	T	F	F	D	G	P	L	S	G	L	T	L	G	T	G	G	R	Y	T	G	S	S	Y	G	D	P	A	N	S	F	K	V	G	S	Y	T	V	V	D	A	L	V	R	Y	D	L	A	R	V	G	M	A	G	S	N
Query Conservation
Alig confidence						.	.	.	.	.	.																				.	.	.																					.	.	.																			.	.	.	.
Template Conservation						.	.	.	.	.	.																				.	.	.																					.	.	.																			.	.	.	.
Template Sequence		Q	G	Q	N	.	.	.	.	.	.	S	V	N	P	L	V	G	R	T	G	V	V	S	G	K	T	F	S	G	.	.	.	K	D	W	S	L	T	A	R	A	G	L	H	Y	E	F	D	L	T	D	S	.	.	.	R	K	D	S	R	M	L	Y	G	V	G	L	N	A	R	F	G	D	.	.	.	.	N	T	R
Template Known Secondary structure						.	.	.	.	.	.																				.	.	.	S	S																S			.	.	.																	T	T	.	.	.	.	T
Template Predicted Secondary structure						.	.	.	.	.	.																				.	.	.																					.	.	.																			.	.	.	.
Template SS confidence
		1256	.	.	.							1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.				.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.				.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.					.	.	.
		709	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	L	H	V	N	N	L	F	D	R	E	Y	V	A	S	C	F	N	T	Y	G	C	F	W	G	A	E	R	Q	V	V	A	T	A	T	F	R	F
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	L	E	V	E	R	S	A	F	G	K	Y	N	T	D	D	A	.	.	.	.	.	.	.	.	.	.	.	.	I	N	A	N	I	R	Y	S	F
Template Known Secondary structure											S		S	S						.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1351	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.													.	1370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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