Job Description P06971 Confidence 2.25% Date Thu Jan 5 10:59:36 GMT 2012 Rank 69 Aligned Residues 257 % Identity 10% Template c2y0lA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:cis-aconitate porin opdh; PDBTitle: crystal structure of pseudomonas aeruginosa opdo Resolution 2.59 Å

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		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	S	G	P	Y	R	I	L	N	K	Q	K	Q	T	G	V	Y	V	Q	D	Q	A	Q	W	D	K	V	L	V	T	L	G	G	R	Y	D	W	A	D	Q	E	S	L	N	R	V	A	G	T	T	D	K	R	D	D	K	Q	F	T	W	R	G	G	V	N	Y	L	F	D	N	G	V	T	P	Y	F	S	Y	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	P	N	N	G	R	I	F	P	Q	I	F	E	G	A	L	L	T	S	K	E	I	K	D	L	G	F	T	A	G	R	L	E	K	T	K	I	D	S	E	D	L	A	L	N	D	K	N	G	R	F	A	G	V	S	A	D	H	F	D	L	G	G	L	D	Y	K	L	T	D	Q	L	T	A	S	Y	H	Y	S
Template Known Secondary structure		B					S	S	S	S													S	S	T	T																			B	B			G	G	G	S	S				B		S												S	S	S
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	F	E	P	S	S	Q	V	G	K	D	G	N	I	F	A	P	S	K	G	K	Q	Y	E	V	G	V	K	Y	V	P	E	D	R	P	I	V	V	T	G	A	V	Y	N	L	T	K	T	N	N	L	M	A	D	P	E	G	S	F	F	S	V	E	G	G	E	I	R	A	R	G	V	E	I	E	A	K	A	A
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Template Sequence		N	L	Q	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	Q	H	F	V	G	L	L	H	S	W	P	I	G	P	G	E	L	T	S	D	L	R	F	A	R	S	T	D	S	G	S	A	K	A	G	G	I	.	.	.	.	.	.	.	.	.	D	N	K	S	L	N	G	M	F	T	Y	S	L	G
Template Known Secondary structure				T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.															S	S	S															T	T		T	T				.	.	.	.	.	.	.	.	.														T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.														.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.										.	.	.	.	260	.	.	.	.	.	.	.	.	.
		611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.											.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	A	S	V	N	V	V	G	S	Y	T	Y	T	D	A	E	Y	T	T	D	T	T	Y	K	G	N	T	P	A	Q	V	.	.	.	.	.	.	.	.	.	.	P	K	H	M	A	S	L	W	A	D	Y	T	F	F	D	G	P	L	S	G	L	T	L	G	T	G	G	R	Y	T	G	S	S	Y	G	D	P	A
Query Conservation																																		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																														.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template Conservation		.	.	.																																																																								.	.	.
Template Sequence		.	.	.	N	H	A	F	G	A	A	W	Q	R	M	N	G	D	D	A	F	P	Y	L	E	G	S	N	P	Y	L	V	N	F	V	Q	V	N	D	F	A	G	P	K	E	R	S	W	Q	L	R	Y	D	Y	D	F	V	G	L	G	I	P	G	L	T	F	M	T	R	Y	V	K	G	D	N	.	.	.	V	E	L
Template Known Secondary structure		.	.	.	T												S	S	S					B	T	T						T	T			S	S					S	T	T												G	G	G	G	T		T	T													.	.	.
Template Predicted Secondary structure		.	.	.																																																																								.	.	.
Template SS confidence
					270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340				.	.	.
		681	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	F	K	V	G	S	Y	T	V	V	D	A	L	V	R	Y	D	L	A	R	V	G	M	A	G	S	N	V	A	L	H	V	N	N	L	F	D	R	E	Y	V	A	S	C	F	N	T	Y	G	C	F	W	G	A	E	R	Q	V	V	A	T	A	T	F	R	F
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.														.	.	.	.
Template Sequence		A	G	Q	G	E	G	R	E	W	E	R	N	T	E	L	Q	Y	V	F	Q	S	G	A	L	K	N	L	G	I	R	W	.	.	.	.	.	.	.	.	R	N	A	T	F	R	S	N	F	T	R	D	I	.	.	.	.	D	E	N	R	L	I	V	S	Y	T	L
Template Known Secondary structure		S																				S	S	T	T	T	T						.	.	.	.	.	.	.	.								S	S	S				.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.														.	.	.	.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.									.	.	.	.	.	380	.	.	.	.	.	.	.					.	.	390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions