Job Description P06971 Confidence 15.67% Date Thu Jan 5 10:59:36 GMT 2012 Rank 42 Aligned Residues 58 % Identity 16% Template c2vqiA_ PDB info PDB header:transport Chain: A: PDB Molecule:outer membrane usher protein papc; PDBTitle: structure of the p pilus usher (papc) translocation pore Resolution 3.2 Å

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		108	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure											.																													.	.	.	.	.
Query SS confidence											.																													.	.	.	.	.
Query Sequence		G	V	S	V	G	T	R	G	A	.	S	N	T	Y	D	H	L	I	I	R	G	F	A	A	E	G	Q	S	Q	N	N	Y	L	N	G	L	K	L	.	.	.	.	.	Q	G	N	F	Y	N	D	A	V	I	D	P	Y	M	L	E	R	A	E	I	M
Query Conservation											.																													.	.	.	.	.
Alig confidence											.																													.	.	.	.	.
Template Conservation
Template Sequence		G	A	S	L	E	S	X	L	P	P	R	L	R	G	Y	A	P	Q	I	T	G	I	A	E	T	N	A	R	V	V	V	S	Q	Q	G	R	V	L	Y	D	S	X	V	P	A	G	P	F	S	I	Q	D	L	D	S	S	V	R	G	R	L	D	V	E
Template Known Secondary structure											G	G	G	S											S	S	S								T	T										S										T	T			S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions