Job Description P06971 Confidence 2.55% Date Thu Jan 5 10:59:36 GMT 2012 Rank 68 Aligned Residues 213 % Identity 13% Template c2qomB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:serine protease espp; PDBTitle: the crystal structure of the e.coli espp autotransporter beta-domain. Resolution 2.66 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.		.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		R	G	G	V	N	Y	L	F	D	N	G	V	T	P	Y	F	S	Y	S	E	S	F	E	P	S	S	Q	V	G	K	D	G	N	I	F	A	P	S	K	G	K	Q	Y	E	V	G	V	K	Y	V	P	E	D	R	P	.	I	V	V	T	G	A	V	Y	N	L	T	K	T	N	N	L	M	A	D	P	E	G	S	F
Query Conservation																																																									.
Alig confidence																																		.	.	.	.																				.
Template Conservation																																		.	.	.	.
Template Sequence		Q	V	G	V	D	K	K	H	E	L	G	L	D	L	F	T	G	F	T	V	T	H	T	D	S	S	A	S	A	D	V	F	.	.	.	.	S	G	K	T	K	S	V	G	A	G	L	Y	A	S	A	M	F	D	S	G	A	Y	I	D	L	I	G	K	Y	V	H	H	D	N	E	Y	T	A	T	F	A	T	R	D
Template Known Secondary structure																															S	S		.	.	.	.																		T	T	S																			S
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		1064	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.					.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.
		591	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.			.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.					.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
Predicted Secondary structure																														.	.																										.	.	.	.
Query SS confidence																														.	.																										.	.	.	.
Query Sequence		F	S	V	E	G	G	E	I	R	A	R	G	V	E	I	E	A	K	A	A	L	S	A	S	V	N	V	V	.	.	G	S	Y	T	Y	T	D	A	E	Y	T	T	D	T	T	Y	K	G	N	T	P	A	Q	V	P	.	.	.	.	K	H	M	A	S	L	W	A	D	Y	T	F	F	D	G	P	L	S	G	L	T
Query Conservation																														.	.																										.	.	.	.
Alig confidence						.	.	.																						.	.																										.	.	.	.
Template Conservation						.	.	.
Template Sequence		Y	S	T	H	.	.	.	S	W	Y	A	G	A	E	A	G	Y	R	Y	H	V	T	E	D	A	W	I	E	P	Q	A	E	L	V	Y	G	S	V	S	G	K	Q	F	A	W	K	D	G	M	H	L	S	M	K	D	K	D	Y	N	P	L	I	G	R	T	G	V	D	V	G	K	S	F	S	G	K	W	K	V	T
Template Known Secondary structure						.	.	.																T	T																					B					S	B
Template Predicted Secondary structure						.	.	.
Template SS confidence
		1144	.	.	.				.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220
		665	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.												.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	T	G	G	R	Y	T	G	S	S	Y	G	D	P	A	N	S	F	K	.	.	.	.	.	.	.	.	.	.	.	V	G	S	Y	T	V	V	D	A	L	V	R	Y	D	L	A	R	V	G	M	A	G	S	N	V	A	L	H	V	N	N	L	F	D	R	E	Y	V	A	S	C	F	N	T	Y	G	C	F	W
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Sequence		A	R	A	G	L	G	Y	Q	F	D	L	L	A	N	G	E	T	V	L	R	D	A	S	G	E	K	R	I	K	G	E	K	D	S	R	M	L	M	S	V	G	L	N	A	E	I	R	D	.	.	.	.	N	V	R	F	G	L	E	F	E	K	S	A	F	G	K	Y	N	V	D	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T		T	T	B				T	T	S	S			S	S	S	S																T	T	.	.	.	.	T					.							S	S	S	S				.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																		.	.	.	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
		1223	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270					.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.
		734	.	.	.	.	.	740	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	E	R	Q	V	V	A	T	A	T	F	R	F
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	N	A	V	N	A	N	F	R	Y	S	F
Template Known Secondary structure		.	.	.
Template Predicted Secondary structure		.	.	.
Template SS confidence
					1290	.	.	.	.	.	.	.	.	.	1300

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions