Return to main results Retrieve Phyre Job Id

Job DescriptionP37759
Confidence100.00%DateThu Jan 5 11:57:31 GMT 2012
Rank38Aligned Residues314
% Identity29%Templated1sb8a_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40......... 50.........60.........70.......
Predicted Secondary structure 


















....











Query SS confidence 















































. . . .



























Query Sequence  KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNRESLADVSDS. . . . ERYVFEHADICDAPAMARIFAQHQPDAV
Query Conservation 











  

  

  
  
    
                 ....  
  
  

 
   
            
Alig confidence 















































....





















..



Template Conservation   










  

  

  
  
    
                             
             ..    
Template Sequence  VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG. . VDYV
Template Known Secondary structure  TTTSTT


SS

S
TT

TTSTT..
S
Template Predicted Secondary structure 


































..



Template SS confidence 















































































   18.20.........30.........40.........50.........60.........70.........80.........90. ....
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  MHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTE
Query Conservation     
                        

  
                     

  


                   
Alig confidence 



































.........

























.........
Template Conservation                                      .........                          .........
Template Sequence  LHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD. . . . . . . . . AKVQSFTYAASSSTYGDHPGLPKVED. . . . . . . . .
Template Known Secondary structure 

S



T.........TT
SGGGGTT


SSB
TT.........
Template Predicted Secondary structure 






























.........























.........
Template SS confidence 















































































   96...100.........110.........120.........130. ........140.........150.......
 
   158.160.........170.........180.........190.........200..... ....210.........220.........230...
Predicted Secondary structure 





























....














Query SS confidence 















































. . . .



























Query Sequence  TTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPE. . . . KLIPLVILNALEGKALPIYGKGDQIRDW
Query Conservation                                           
      ....                            
Alig confidence  .














































....



























Template Conservation  .        
                               
                                      
Template Sequence  . TIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDF
Template Known Secondary structure  .





S






TT



STT

T


SSS



Template Predicted Secondary structure  .







































Template SS confidence 















































































   158.160.........170.........180.........190.........200.........210.........220.........230......
 
   234.....240.........250.. .......260.........270.........280.........290.........300.........310.
Predicted Secondary structure 






..


































Query SS confidence 


















. .


























































Query Sequence  LYVEDHARALYTVVTEGKA. . GETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDAEKI
Query Conservation    
                ..     
      
  
    
                                 
  

Alig confidence 


















..





































...

















Template Conservation    
 
                     
      
  
    
    
            ...             
  

Template Sequence  CYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVY. . . RDFREGDVRHSLADISKA
Template Known Secondary structure  T

GGG
SS
S

TT






...


TT

SB

B

Template Predicted Secondary structure 



























...









Template SS confidence 















































































   237..240.........250.........260.........270.........280.........290..... ....300.........310...
 
   312.......320.........330.........
Predicted Secondary structure 






Query SS confidence 



























Query Sequence  GRALGWKPQETFESGIRKTVEWYLSNTK
Query Conservation     

  
   
 
 
  

 
      
Alig confidence 



























Template Conservation     

  
   
 
 
   
 

   
 
Template Sequence  AKLLGYAPKYDVSAGVALAMPWYIMFLK
Template Known Secondary structure  T






T
Template Predicted Secondary structure 







Template SS confidence 



























   314.....320.........330.........340.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions