Return to main results Retrieve Phyre Job Id

Job DescriptionP37759
Confidence100.00%DateThu Jan 5 11:57:31 GMT 2012
Rank17Aligned Residues333
% Identity20%Templated1rkxa_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNRESLADVSDSERYVFEHADICDAPAMARIFAQHQPDAVMHLA
Query Conservation 











  

  

  
  
    
                   
  
  

 
   
               
Alig confidence 










































..


































Template Conservation   










  

  
   
  
    
            ..     
     

 
                   
Template Sequence  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA. . RVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA
Template Known Secondary structure  TTTSTT
SS
SSSS
T..TTTTTS

TT


S

Template Predicted Secondary structure 












..











Template SS confidence 















































































   11........20.........30.........40.........50... ......60.........70.........80........
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  AESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAY
Query Conservation                          

  
                     

  


                       
Alig confidence 

































........





































Template Conservation 
                                 ........        
   
                         
Template Sequence  AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVG. . . . . . . . GVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNS
Template Known Secondary structure  S



T
........




GGGB



SSS
B
TTS
B

SS
Template Predicted Secondary structure 














........



























Template SS confidence 















































































   8990.........100.........110.........120.. .......130.........140.........150.........160
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  APSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHAR
Query Conservation                                       
                                    
     
Alig confidence 















































































Template Conservation 
   
                                

                                   
 
   
Template Sequence  KGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLS
Template Known Secondary structure  S
GGG





TT


SS
TT


S
TT


T
Template Predicted Secondary structure 


































Template SS confidence 















































































   161........170.........180.........190.........200.........210.........220.........230.........240
 
   242.......250.... .....260.........270.........280.........290.........300.........310....
Predicted Secondary structure 







.......
































Query SS confidence 












. . . . . . .



























































Query Sequence  ALYTVVTEGKAGE. . . . . . . TYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDAEKIGRA
Query Conservation               .......   
      
  
    
                                 
  

   
Alig confidence 












.......



























..............

















Template Conservation                                
  
    
    
    ..............          
  

   
Template Sequence  GYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGAS. . . . . . . . . . . . . . WQLEAHYLKLDCSKAKMQ
Template Known Secondary structure  T
GGG
S



GGG

TT

..............






B

Template Predicted Secondary structure 




















..............






Template SS confidence 















































































   241........250.........260.........270.........280........ .290.........300......
 
   315....320.........330.........340.........350.........360.
Predicted Secondary structure 














Query SS confidence 














































Query Sequence  LGWKPQETFESGIRKTVEWYLSNTKWVDNVKSGAYQSWIEQNYEGRQ
Query Conservation 

  
   
 
 
  

 
           
                
Alig confidence 





















...





















Template Conservation 

  
     
 
   
 
 
 ...              
       
Template Sequence  LGWHPRWNLNTTLEYIVGWHKN. . . WLSGTDMHEYSITEINNYMNTK
Template Known Secondary structure 






...TT



Template Predicted Secondary structure 






...






Template SS confidence 














































   314.....320.........330..... ....340.........350.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions