Job Description P37759 Confidence 99.03% Date Thu Jan 5 11:57:31 GMT 2012 Rank 91 Aligned Residues 199 % Identity 14% Template c3r6dA_ PDB info PDB header:lyase, isomerase Chain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: crystal structure of nad-dependent epimerase/dehydratase from2 veillonella parvula dsm 2008 with cz-methylated lysine Resolution 1.25 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	L	V	T	G	G	A	G	F	I	G	S	A	V	V	R	H	I	I	N	N	T	Q	D	S	V	V	N	V	D	K	L	T	Y	A	G	N	R	E	S	L	A	D	V	S	D	S	E	R	Y	V	F	E	H	A	D	I	C	D	A	P	A	M	A	R	I	F	A	Q	H	Q	P	D	A	V	M	H	L	A
Query Conservation
Alig confidence																																														.	.	.	.	.																															.
Template Conservation																																														.	.	.	.	.																															.
Template Sequence		Y	I	T	I	L	G	A	A	G	Q	I	A	Q	L	T	A	T	L	L	T	Y	T	D	X	H	I	T	L	Y	G	R	Q	L	K	T	R	I	P	P	E	I	I	D	H	.	.	.	.	.	E	R	V	T	V	I	E	G	S	F	Q	N	P	G	L	E	Q	A	V	T	N	A	E	V	V	F	V	G	A	X	.
Template Known Secondary structure							S	T	T	S	T	T	T																			S	S					S						T	S	.	.	.	.	.	T	T								T	T									T	T		S					S			.
Template Predicted Secondary structure																																														.	.	.	.	.																															.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.						.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	S	H	V	D	R	S	I	T	G	P	A	A	F	I	E	T	N	I	V	G	T	Y	V	L	L	E	A	A	R	N	Y	W	S	A	L	D	S	D	K	K	N	S	F	R	F	H	H	I	S	T	D	E	V	Y	G	D	L	P	H	P	D	E	V	N	N	T	E	E	L	P	L	F	T	E	T	T	A	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	G	S	D	X	A	S	I	V	K	A	L	S	.	.	.	.	.	.	.	.	.	R	N	I	R	R	V	I	G	V	S	X	A	G	L	S	G	E	F	P	V	.	.	.	.	.	.	.	.	.	.	.	A	L	E	K	W	T	F	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.												T	T	T	T	S		S			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				80	.	.	.	.	.	.	.	.	.	90	.	.	.										.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.												.	.	.	.	.	.	120	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	S	S	P	Y	S	A	S	K	A	S	S	D	H	L	V	R	A	W	K	R	T	Y	G	L	P	T	I	V	T	N	C	S	N	N	Y	G	P	Y	H	F	P	E	K	L	I	P	L	V	I	L	N	A	L	E	G	K	A	L	P	I	Y	G	K	G	D	Q	I	R	D	W	L	Y	V	E	D	H	A	R
Query Conservation
Alig confidence																						.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	L	P	I	S	Y	V	Q	G	E	R	Q	A	R	N	V	L	R	E	S	.	.	.	.	N	L	N	Y	T	I	L	R	L	T	W	L	Y	N	D	P	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	E	L	I	P	E	G	A	Q	F	N	D	A	Q	V	S	R	E	A	V	V	K
Template Known Secondary structure		T	S																		S	.	.	.	.		S																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S
Template Predicted Secondary structure																						.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160																.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		242	.	.	.	.	.	.	.	250	.	.					.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		A	L	Y	T	V	V	T	E	G	K	A	.	.	.	.	G	E	T	Y	N	I	G	G	H	N	E
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.
Template Conservation
Template Sequence		A	I	F	D	I	L	H	A	A	D	E	T	P	F	H	R	T	S	I	G	V	G	E	P	G	T
Template Known Secondary structure								T		S			G	G	G	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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