Job Description P37759 Confidence 98.60% Date Thu Jan 5 11:57:31 GMT 2012 Rank 166 Aligned Residues 230 % Identity 11% Template c3imfA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:short chain dehydrogenase; PDBTitle: 1.99 angstrom resolution crystal structure of a short chain2 dehydrogenase from bacillus anthracis str. 'ames ancestor' Resolution 1.99 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.						.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.
Query Sequence		K	I	L	V	T	G	G	A	G	F	I	G	S	A	V	V	R	H	I	I	N	N	T	Q	D	S	V	V	N	V	D	K	L	T	Y	A	G	N	R	E	S	L	A	D	V	S	D	S	E	R	Y	V	F	E	H	A	D	I	C	D	A	P	A	M	A	R	I	F	A	Q	H	.	.	.	.	.	Q	P	D	A
Query Conservation																																																																									.	.	.	.	.
Alig confidence																																																	.																								.	.	.	.	.
Template Conservation																																																	.
Template Sequence		V	V	I	I	T	G	G	S	S	G	X	G	K	G	X	A	T	R	F	A	K	E	G	A	R	V	V	I	T	G	R	T	K	E	K	L	E	E	A	K	L	E	I	E	Q	F	P	.	G	Q	I	L	T	V	Q	X	D	V	R	N	T	D	D	I	Q	K	X	I	E	Q	I	D	E	K	F	G	R	I	D	I
Template Known Secondary structure						T	T	T	T	S													T	T								S															S	T	.	T									T	T																	S
Template Predicted Secondary structure																																																	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	H	L	A	A	E	S	H	V	D	R	S	I	T	G	P	A	A	F	I	E	T	N	I	V	G	T	Y	V	L	L	E	A	A	R	N	Y	W	S	A	L	D	S	D	K	K	N	S	F	R	F	H	H	I	S	T	D	E	V	Y	G	D	L	P	H	P	D	E	V	N	N	T	E	E	L	P	L	F	T
Query Conservation
Alig confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	N	N	A	A	G	N	F	I	C	P	A	E	D	L	S	V	N	G	W	N	S	V	I	N	I	V	L	N	G	T	F	Y	C	S	Q	A	I	G	K	Y	W	I	E	K	G	I	K	G	N	I	I	N	X	V	A	T	Y	A	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														G	G	G																																T											G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	T	A	Y	A	P	S	S	P	Y	S	A	S	K	A	S	S	D	H	L	V	R	A	W	K	R	T	Y	G	L	P	T	I	V	T	N	C	S	N	N	Y	G	P	Y	H	F	P	E	K	L	I	P	L	V	I	L	N	A	L	E	G	K	A	L	P	I	Y	G	K	G	D	Q	I	R	D	W	L	Y	V
Query Conservation
Alig confidence		.	.																																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	D	A	G	P	G	V	I	H	S	A	A	A	K	A	G	V	L	A	X	T	K	T	L	A	V	E	W	G	R	K	Y	G	I	R	V	N	A	I	A	P	G	P	I	E	R	T	G	G	.	.	.	.	.	.	.	.	.	.	.	A	E	X	A	K	R	T	I	Q	S	V	P	L	G	R	L	G	T	P
Template Known Secondary structure		.	.	S			T	T																																						B	S	S				.	.	.	.	.	.	.	.	.	.	.				S					T	T	S	T	T		S		B
Template Predicted Secondary structure		.	.																																																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.												.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.				.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		E	D	H	A	R	A	L	Y	T	V	V	T	E	G	K	A	.	.	.	G	E	T	Y	N	I	G	G	H	N	E	K
Query Conservation																		.	.	.
Alig confidence																		.	.	.
Template Conservation
Template Sequence		E	E	I	A	G	L	A	Y	Y	L	C	S	D	E	A	A	Y	I	N	G	T	C	X	T	X	D	G	G	Q	H	L
Template Known Secondary structure													S	G	G	G	T	T			S						S	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions