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Job DescriptionP37759
Confidence98.65%DateThu Jan 5 11:57:31 GMT 2012
Rank156Aligned Residues234
% Identity11%Templatec3gdfA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:probable nadp-dependent mannitol dehydrogenase; PDBTitle: crystal structure of the nadp-dependent mannitol dehydrogenase from2 cladosporium herbarum.
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10. ........20.........30... ......40.........50.........60......... 70...
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Query Sequence  KILVTGGAGF. . IGSAVVRHIINNTQDSVVNVDK. LTYAGNRESLADVSDSERYVFEHADICDAPAMARIF. . . . . AQHQ
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Template Sequence  VVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQ
Template Known Secondary structure  SS

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   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   74.....80.........90.........100.........110.........120.........130.........140.........150...
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Query Sequence  PDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELP
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Template Sequence  IDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHI. . . . . . . . . . . . . . . .
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   102.......110.........120.........130.........140.........150.........160.....
 
   154.....160.........170.........180.........190.........200.........210.........220.........230...
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Query Sequence  LFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDW
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Template Sequence  . . . . ANFPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKE. . . .
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   166...170.........180.........190.........200.........210.........220.........230.......
 
   234.....240.........250.........260.
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Query Sequence  LYVEDHARALYTVVTEGKAGETYNIGGH
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Template Sequence  . . LKGAYVYFASDASTYTTGADLLIDGG
Template Known Secondary structure  ..TSGGGTT

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   238.240.........250.........260...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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