Return to main results Retrieve Phyre Job Id

Job DescriptionP37759
Confidence96.61%DateThu Jan 5 11:57:31 GMT 2012
Rank347Aligned Residues98
% Identity12%Templatec3fi9B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of malate dehydrogenase from porphyromonas2 gingivalis
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20..... ....30.........40.. .......50.........60.........70.......
Predicted Secondary structure 







..







.















Query SS confidence 
























. .
















.


































Query Sequence  MKILVTGGAGFIGSAVVRHIINNTQ. . DSVVNVDKLTYAGNRES. LADVSDSERYVFEHADICDAPAMARIFAQHQPDAV
Query Conservation 












  

  

  
 .. 
    
          .         
  
  

 
   
            
Alig confidence 
























..
















.
















......











Template Conservation   

 



 
 

   
  
       

 
 
       
   

              
 ......   
  




 
Template Sequence  EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDI. . . . . . KEALTDAKYIVS
Template Known Secondary structure  SSTTSTT

S

S


TT


S
......TT
Template Predicted Secondary structure 





















......



Template SS confidence 















































































   7..10.........20.........30.........40.........50.........60........ .70.........80
 
   78.80.........90.........100.........110.....
Predicted Secondary structure 












Query SS confidence 





































Query Sequence  MHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYW
Query Conservation     
                        

  
     
Alig confidence 


...........























Template Conservation     ...........

 


  
  
       
    
Template Sequence  SGG. . . . . . . . . . . TREDLLKGNAEIAAQLGKDIKSYC
Template Known Secondary structure 


...........

Template Predicted Secondary structure 


...........

Template SS confidence 





































   81.. ......90.........100.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions