Job Description P37759 Confidence 99.68% Date Thu Jan 5 11:57:31 GMT 2012 Rank 77 Aligned Residues 212 % Identity 13% Template c3dqpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase ylbe; PDBTitle: crystal structure of the oxidoreductase ylbe from2 lactococcus lactis, northeast structural genomics3 consortium target kr121. Resolution 1.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		M	K	I	L	V	T	G	G	A	G	F	I	G	S	A	V	V	R	H	I	I	N	N	T	Q	D	S	V	V	N	V	D	K	L	T	Y	A	G	N	R	E	S	L	A	D	V	S	D	S	E	R	Y	V	F	E	H	A	D	I	C	.	D	A	P	A	M	A	R	I	F	A	Q	H	Q	P	D	A	V	M	H
Query Conservation																																																														.
Alig confidence																																											.	.	.	.	.	.	.	.	.											.																			.
Template Conservation																																											.	.	.	.	.	.	.	.	.																														.
Template Sequence		X	K	I	F	I	V	G	S	T	G	R	V	G	K	S	L	L	K	S	L	S	T	T	D	Y	Q	I	Y	A	G	A	R	K	V	E	Q	V	P	Q	Y	N	.	.	.	.	.	.	.	.	.	N	V	K	A	V	H	F	D	V	D	W	T	P	E	E	X	A	K	Q	L	H	G	X	D	A	I	I	N	V	.
Template Known Secondary structure								S	T	T	S											T	T	S	S								S	S	G	G	G	S				T	.	.	.	.	.	.	.	.	.	T								T	T	S							T	T	T	T	T		S						.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.										.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	E	S	H	V	D	R	S	I	T	G	P	A	A	F	I	E	T	N	I	V	G	T	Y	V	L	L	E	A	A	R	N	Y	W	S	A	L	D	S	D	K	K	N	S	F	R	F	H	H	I	S	T	D	E	V	Y	G	D	L	P	H	P	D	E	V	N	N	T	E	E	L	P	L	F	T	E	T	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	S	G	S	G	G	K	S	L	L	K	V	D	L	Y	G	A	V	K	L	X	Q	A	A	E	K	.	.	.	.	.	.	.	.	.	A	E	V	K	R	F	I	L	L	S	T	I	F	S	L	Q	P	E	K	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.				T	T	S	S																			.	.	.	.	.	.	.	.	.	T	T										T	T	T	T		G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.										.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	A	P	S	S	P	Y	S	A	S	K	A	S	S	D	H	L	V	R	A	W	K	R	T	Y	G	L	P	T	I	V	T	N	C	S	N	N	Y	G	P	Y	H	F	P	E	K	L	I	P	L	V	I	L	N	A	L	E	G	K	A	L	P	I	Y	G	K	G	D	Q	I	R	D	W	L	Y	V	E	D	H
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	A	G	F	D	A	L	K	D	Y	Y	I	A	K	H	F	A	D	L	Y	L	T	K	E	T	N	L	D	Y	T	I	I	Q	P	G	A	L	T	E	E	E	A	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	D	I	N	D	E	V	S	A	S	N	T	I	G	D	V
Template Known Secondary structure			S						T																	S												S				S				S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160																			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	A	L	Y	T	V	V	T	E	G	K	A	G	E	T	Y	N	I	G	G	H	N	E	K	K	N	I	D	V	V	L	T	I	C	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	T	I	K	E	L	V	X	T	D	H	S	I	G	K	V	I	S	X	H	N	G	K	T	A	I	K	E	A	L	E	S	L	L	E
Template Known Secondary structure										T		G	G	G	T	T																		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions