Job Description P37759 Confidence 98.39% Date Thu Jan 5 11:57:31 GMT 2012 Rank 224 Aligned Residues 219 % Identity 16% Template c3diiB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of a carbohydrate specific scor enzyme2 from clostridium thermocellum, ligand-free form Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		K	I	L	V	T	G	G	A	G	F	I	G	S	A	V	V	R	H	I	I	N	N	T	Q	D	S	V	V	N	V	D	K	L	T	Y	A	G	N	R	E	S	L	A	D	V	S	D	S	E	R	Y	V	F	E	H	A	D	I	C	D	A	P	A	M	A	R	I	F	A	.	.	Q	H	Q	P	D	A	V	M	H
Query Conservation																																																																							.	.
Alig confidence																																										.	.	.	.	.																									.	.
Template Conservation																																										.	.	.	.	.
Template Sequence		G	V	I	V	T	G	G	G	H	G	I	G	K	Q	I	C	L	D	F	L	E	A	G	D	K	V	C	F	I	D	I	D	E	K	R	S	A	D	F	A	.	.	.	.	.	K	E	R	P	N	L	F	Y	F	H	G	D	V	A	D	P	L	T	L	K	K	F	V	E	Y	A	M	E	K	L	Q	R	I	D	V
Template Known Secondary structure							S	T	T	S													T	T								S										.	.	.	.	.	T	T		T	T								T	T																	S
Template Predicted Secondary structure																																										.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.						.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	E	S	H	V	D	R	S	I	T	G	P	A	A	F	I	E	T	N	I	V	G	T	Y	V	L	L	E	A	A	R	N	Y	W	S	A	L	D	S	D	K	K	N	S	F	R	F	H	H	I	S	T	D	E	V	Y	G	D	L	P	H	P	D	E	V	N	N	T	E	E	L	P	L	F	T	E	T	T
Query Conservation
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	N	N	A	C	G	S	K	G	I	L	S	S	L	L	Y	E	E	F	D	Y	I	L	S	V	G	L	K	A	P	Y	E	L	S	R	L	C	R	D	E	L	I	K	N	K	G	R	I	I	N	I	A	S	T	R	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q
Template Known Secondary structure												G	G	G	T														T										T								T									G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																						.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	A	P	S	S	P	Y	S	A	S	K	A	S	S	D	H	L	V	R	A	W	K	R	T	Y	G	L	P	T	I	V	T	N	C	S	N	N	Y	G	P	Y	H	F	P	E	K	L	I	P	L	V	I	L	N	A	L	E	G	K	A	L	P	I	Y	G	K	G	D	Q	I	R	D	W	L	Y	V	E	D	H
Query Conservation
Alig confidence																															.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	P	D	S	E	A	Y	A	S	A	K	G	G	I	V	A	L	T	H	A	L	A	M	S	L	G	P	D	.	.	V	L	V	N	C	I	A	P	G	W	I	N	V	T	E	F	T	Q	E	D	C	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	P	A	G	K	V	G	T	P	K	D	I
Template Known Secondary structure				T	T																							T	T	T	.	.	S									S	B												.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	T	T	S	S		B
Template Predicted Secondary structure																															.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.															190	.	.	.	.	.	.	.	.	.	200	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	A	L	Y	T	V	V	T	E	G	K	A	G	E	T	Y	N	I	G	G	H	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	N	M	V	L	F	L	C	Q	Q	D	F	I	T	G	E	T	I	I	V	D	G	G
Template Known Secondary structure										T		S	S			S						S	T	T
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions