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Job DescriptionP37759
Confidence98.72%DateThu Jan 5 11:57:31 GMT 2012
Rank131Aligned Residues226
% Identity17%Templatec3cxtA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:dehydrogenase with different specificities; PDBTitle: quaternary complex structure of gluconate 5-dehydrogenase from2 streptococcus suis type 2
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.. .....
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Query Sequence  KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNRESLADVSDSERYVFEHADICDAPAMARIFAQH. . . . QPDAV
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Template Sequence  IALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMA. AYKAAGINAHGYVCDVTDEDGIQAMVAQIESEVGIIDI
Template Known Secondary structure  T
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TT
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   78.80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  MHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTE
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Template Sequence  LVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSE. . . . . . . . . . . . . . . . . . . .
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GGGS
TT


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   158.160.........170.........180.........190.........200.........210.........220.........230.......
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Query Sequence  TTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVE
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Template Sequence  . LGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTHPFDQFIIAKTP. . . . . . . . . . . . AARWGEAE
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TT
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   155....160.........170.........180.........190.........200.........210... ......220.
 
   238.240.........250.. .......260.
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Query Sequence  DHARALYTVVTEGKA. . . GETYNIGGH
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Template Sequence  DLMGPAVFLASDASNFVNGHILYVDGG
Template Known Secondary structure  SGGGTT

S
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   234.....240.........250.........260
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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