Job Description P37759 Confidence 98.55% Date Thu Jan 5 11:57:31 GMT 2012 Rank 176 Aligned Residues 219 % Identity 15% Template c2z1nA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dehydrogenase; PDBTitle: crystal structure of ape0912 from aeropyrum pernix k1 Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		K	I	L	V	T	G	G	A	G	F	I	G	S	A	V	V	R	H	I	I	N	N	T	Q	D	S	V	V	N	V	D	K	L	T	Y	A	G	N	R	E	.	S	L	A	D	V	S	D	S	E	R	Y	V	F	E	H	A	D	I	C	D	A	P	A	M	A	R	I	F	A	Q	H	Q	P	D	A	V	M	H	L
Query Conservation																																										.
Alig confidence																																										.
Template Conservation
Template Sequence		L	A	V	V	T	A	G	S	S	G	L	G	F	A	S	A	L	E	L	A	R	N	G	A	R	L	L	L	F	S	R	N	R	E	K	L	E	A	A	A	S	R	I	A	S	L	V	S	G	A	Q	V	D	I	V	A	G	D	I	R	E	P	G	D	I	D	R	L	F	E	K	A	R	D	L	G	G	A	D	I
Template Known Secondary structure							T	T	T	S													T	T								S																S	T	T										T	T															T	T			S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		A	A	E	S	H	V	D	R	S	I	T	G	P	A	A	F	I	E	.	.	.	T	N	I	V	G	T	Y	V	L	L	E	A	A	R	N	Y	W	S	A	L	D	S	D	K	K	N	S	F	R	F	H	H	I	S	T	D	E	V	Y	G	D	L	P	H	P	D	E	V	N	N	T	E	E	L	P	L	F	T	E
Query Conservation																				.	.	.
Alig confidence																				.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	Y	S	T	G	G	P	R	P	G	R	F	M	E	L	G	V	E	D	W	D	E	S	Y	R	L	L	A	R	S	A	V	W	V	G	R	R	A	A	E	Q	M	V	E	K	G	W	G	R	M	V	Y	I	G	S	V	T	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												B		G	G	G													T																			T										G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		T	T	A	Y	A	P	S	S	P	Y	S	A	S	K	A	S	S	D	H	L	V	R	A	W	K	.	.	.	R	T	Y	G	L	P	T	I	V	T	N	C	S	N	N	Y	G	P	Y	H	F	P	E	K	L	I	P	L	V	I	L	N	A	L	E	G	K	A	L	P	I	Y	G	K	G	D	Q	I	R	D	W	L
Query Conservation																											.	.	.
Alig confidence		.																									.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	R	P	W	Q	D	L	A	L	S	N	I	M	R	L	P	V	I	G	V	V	R	T	L	A	L	E	L	A	P	H	G	V	T	V	N	A	V	L	P	S	L	I	L	T	D	R	V	R	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	M	G	R	V	G
Template Known Secondary structure		.	S			T	T	B							T															G	G	G	T																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S
Template Predicted Secondary structure		.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.																								.	200	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		Y	V	E	D	H	A	R	A	L	Y	T	V	V	T	E	G	K	.	.	.	A	G	E	T	Y	N	I	G	G	H	N	E	K
Query Conservation																			.	.	.
Alig confidence																			.	.	.
Template Conservation
Template Sequence		K	P	E	E	L	A	S	V	V	A	F	L	A	S	E	K	A	S	F	I	T	G	A	V	I	P	V	D	G	G	A	H	I
Template Known Secondary structure														T	S	G	G	G	T	T			S						S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions