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Job DescriptionP37759
Confidence98.67%DateThu Jan 5 11:57:31 GMT 2012
Rank148Aligned Residues195
% Identity17%Templatec2yutA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putative short-chain oxidoreductase; PDBTitle: crystal structure of putative short-chain oxidoreductase tthb094 from2 thermus thermophilus hb8
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNRESLADVSDSERYVFEHADICDAPAMARIFAQHQPDAVMHL
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Template Sequence  XRVLITGATGGLGGAFARAL. . KGHDLLLSGRR. . . . . . AGALAELAREVGARALPADLADELEAKALLEEAGPLDLLVH
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Query Sequence  AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTA
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Template Sequence  AVGKAGRASVREDLVEEXLAAHLLTAAFVLKHA. . . . . . . RFQKGARAVFFGAYPRY. . . . . . . . . . . . . . . . . . . . . VQ
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   73......80.........90.........100..... ....110.........120.. ..
 
   161........170.........180... ......190.........200.........210.........220.........230.......
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Query Sequence  YAPSSPYSASKASSDHLVRAWKR. . . TYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVE
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Template Sequence  VPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAP. . . . . . . . . . . . . . . . . . . . . LGGPPKGALSPE
Template Known Secondary structure  STTBTTT




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   128.130.........140.........150.........160.........170.... .....180......
 
   238.240.........250..
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Query Sequence  DHARALYTVVTEGKA
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Template Sequence  EAARKVLEGLFPVPA
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   187..190.........200.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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