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Job DescriptionP37759
Confidence98.41%DateThu Jan 5 11:57:31 GMT 2012
Rank219Aligned Residues231
% Identity13%Templatec2pd6D_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:estradiol 17-beta-dehydrogenase 8; PDBTitle: structure of human hydroxysteroid dehydrogenase type 8, hsd17b8
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNRESLADVSDSERYVFEHADICDAPAMARIFAQHQPDAVMHLA
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Template Sequence  LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCA
Template Known Secondary structure  TTTSTT
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TTSSS

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   13......20.........30.........40.........50.........60.........70.........80.........90..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  AESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAY
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Template Sequence  GITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVG. . . . . . . . . . . . . . . . . . Q
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GGG

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   105....110.........120.........130.........140.........150.........160..... .
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  APSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHAR
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Template Sequence  TNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLG. . . . . . . . . . . DPEDVAD
Template Known Secondary structure  GGGT
SB
STTTTTS
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   167..170.........180.........190.........200.........210.........220........ .230.....
 
   242.......250. ........260.
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Query Sequence  ALYTVVTEGK. . . AGETYNIGGH
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Template Sequence  VVAFLASEDSGYITGTSVEVTGG
Template Known Secondary structure  SGGGTT

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   236...240.........250........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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