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Job DescriptionP37759
Confidence100.00%DateThu Jan 5 11:57:31 GMT 2012
Rank27Aligned Residues301
% Identity30%Templatec2p5uC_
PDB info PDB header:isomeraseChain: C: PDB Molecule:udp-glucose 4-epimerase; PDBTitle: crystal structure of thermus thermophilus hb8 udp-glucose 4-2 epimerase complex with nad
Resolution2.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNRESLADVSDSERYVFEHADICDAPAMARIFAQHQPDAVMHL
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Template Sequence  MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE. . . . . . . NVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQ
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TTTTSTT



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   1........10.........20.........30......... 40.........50.........60.........70...
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTA
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Template Sequence  AAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQ. . . . . . . . . YGVEKLVFASTGGAIYGEVPEGERAEET. . . . . . . . WP
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   74.....80.........90.........100...... ...110.........120.........130.... ..
 
   161........170.........180.........190.........200.........210....... ..220.........230..
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Query Sequence  YAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALE. . . . . . . . GKALPIYGKGDQIRD
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Template Sequence  PRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRD
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   137..140.........150.........160.........170.........180.........190.........200.........210......
 
   233......240.........250.........260.........270.........280.........290.........300.........310..
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Query Sequence  WLYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDAEKIG
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Template Sequence  YVYVGDVAEAHALALFSL. . EGIYNVGTGEGHTTREVLMAVAEAAGKAPE. . . . . . . . VQPAPPRPGDLERSVLSPLKLM
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   217..220.........230.... .....240.........250.........260.... .....270.........280......
 
   313......320.........330......
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Query Sequence  RALGWKPQETFESGIRKTVEWYLS
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Template Sequence  . AHGWRPKVGFQEGIRLTVDHFRG
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   287..290.........300.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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