Job Description P37759 Confidence 98.50% Date Thu Jan 5 11:57:31 GMT 2012 Rank 197 Aligned Residues 170 % Identity 13% Template c2hlpB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of the e267r mutant of a halophilic2 malate dehydrogenase in the apo form Resolution 2.59 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																										.	.																								.	.	.	.
Query SS confidence																										.	.																								.	.	.	.
Query Sequence		K	I	L	V	T	G	G	A	G	F	I	G	S	A	V	V	R	H	I	I	N	N	T	Q	.	.	D	S	V	V	N	V	D	K	L	T	Y	A	G	N	R	E	S	L	A	D	V	S	D	.	.	.	.	S	E	R	Y	V	F	E	H	A	D	I	C	D	A	P	A	M	A	R	I	F	A	Q	H	Q	P	D
Query Conservation																										.	.																								.	.	.	.
Alig confidence																										.	.																								.	.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.
Template Sequence		K	V	S	V	V	G	A	A	G	T	V	G	A	A	A	G	Y	N	I	A	L	R	D	I	A	D	E	V	V	F	V	D	I	P	D	K	E	D	D	T	V	G	Q	A	A	D	T	N	H	G	I	A	Y	D	S	N	T	R	V	R	Q	G	G	Y	E	.	.	.	.	.	.	.	.	.	D	T	A	G	S	D
Template Known Secondary structure							T	T	T	S													T	T			S								G	G	G																T	T	T										G	G	.	.	.	.	.	.	.	.	.	G	G	T	T		S
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.										.	.	90	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	M	H	L	A	A	E	S	H	V	D	R	S	I	T	G	P	A	A	F	I	E	T	N	I	V	G	T	Y	V	L	L	E	A	A	R	N	Y	W	S	A	L	D	S	D	K	K	N	S	F	R	F	H	H	I	S	T	D	E	V	Y	G	D	L	P	H	P	D	E	V	N	N	T	E	E	L	P	L	F
Query Conservation
Alig confidence														.	.																									.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.																									.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	V	I	T	A	G	I	P	R	Q	P	.	.	G	Q	T	R	I	D	L	A	G	D	N	A	P	I	M	E	D	I	Q	S	S	L	D	E	.	.	.	.	.	.	.	.	.	H	N	D	D	Y	I	S	L	T	T	S	N	P	V	D	.	.	.	.	.	.	.	.	.	.	.	.	L	L	N	R	H	L
Template Known Secondary structure													T	.	.	T																							T	.	.	.	.	.	.	.	.	.	T		S	S								S	S			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.																									.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.										.	130	.	.	.	.	.	.	.	.	.	140	.	.	.													.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	T	T	A	Y	A	P	S	S	P	Y	S	A	S	K	A	S	S	D	H	L	V	R	A	W	K	R	T	Y	G	L	P	T	I	V	T	N	C	S	N	N	Y	G	P	Y	H	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	A	G	D	R	S	R	E	Q	V	I	G	F	G	G	R	L	D	S	A	R	F	R	Y	V	L	S	E	E	F	D	A	P	V	Q	N	V	E	G	T	I	L	G	E	H	G	D
Template Known Secondary structure				T	S		S		T	T	T																						T			G	G	G									S	S	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions